Gene : Potri.001G194000 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR10544//PTHR10544:SF1 - 60S RIBOSOMAL PROTEIN L28 // SUBFAMILY NOT NAMED Genomic Order:  2007
Name:  ? Potri.001G194000 Secondary Identifier:  ? PAC:37279089
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G194000 0.5kb upstream 0.5kb upstream 2642 true Chr01: 17756718-17759359 Populus trichocarpa
Potri.001G194000 0.5kb upstream 0.5kb upstream 500 false Chr01: 17756718-17757217 Populus trichocarpa
Potri.001G194000 0.5kb downstream 0.5kb downstream 2642 true Chr01: 17757218-17759859 Populus trichocarpa
Potri.001G194000 0.5kb downstream 0.5kb downstream 500 false Chr01: 17759360-17759859 Populus trichocarpa
Potri.001G194000 1.0kb upstream 1.0kb upstream 3142 true Chr01: 17756218-17759359 Populus trichocarpa
Potri.001G194000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17756218-17757217 Populus trichocarpa
Potri.001G194000 1.0kb downstream 1.0kb downstream 3142 true Chr01: 17757218-17760359 Populus trichocarpa
Potri.001G194000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17759360-17760359 Populus trichocarpa
Potri.001G194000 2.0kb upstream 2.0kb upstream 4142 true Chr01: 17755218-17759359 Populus trichocarpa
Potri.001G194000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17755218-17757217 Populus trichocarpa
Potri.001G194000 2.0kb downstream 2.0kb downstream 4142 true Chr01: 17757218-17761359 Populus trichocarpa
Potri.001G194000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17759360-17761359 Populus trichocarpa
Potri.001G194000 5.0kb upstream 5.0kb upstream 7142 true Chr01: 17752218-17759359 Populus trichocarpa
Potri.001G194000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17752218-17757217 Populus trichocarpa
Potri.001G194000 5.0kb downstream 5.0kb downstream 7142 true Chr01: 17757218-17764359 Populus trichocarpa
Potri.001G194000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17759360-17764359 Populus trichocarpa
Potri.001G194000 10.0kb upstream 10.0kb upstream 12142 true Chr01: 17747218-17759359 Populus trichocarpa
Potri.001G194000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17747218-17757217 Populus trichocarpa
Potri.001G194000 10.0kb downstream 10.0kb downstream 12142 true Chr01: 17757218-17769359 Populus trichocarpa
Potri.001G194000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17759360-17769359 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459853 5262 Malpighiales View MSA
124237646 5268 Malvidae View MSA
124072895 5270 Rosid View MSA
123746197 5271 Pentapetalae View MSA
122786933 5272 Eudicot View MSA
122049250 5273 Angiosperm View MSA
121348923 5274 Embryophyte View MSA
123424789 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain