Gene : Potri.001G194400 P. trichocarpa v3.1
Defline:  (1 of 2) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  2011
Name:  ? Potri.001G194400 Secondary Identifier:  ? PAC:37277339
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G194400 0.5kb upstream 0.5kb upstream 1997 true Chr01: 17840072-17842068 Populus trichocarpa
Potri.001G194400 0.5kb upstream 0.5kb upstream 500 false Chr01: 17841569-17842068 Populus trichocarpa
Potri.001G194400 0.5kb downstream 0.5kb downstream 1997 true Chr01: 17839572-17841568 Populus trichocarpa
Potri.001G194400 0.5kb downstream 0.5kb downstream 500 false Chr01: 17839572-17840071 Populus trichocarpa
Potri.001G194400 1.0kb upstream 1.0kb upstream 2497 true Chr01: 17840072-17842568 Populus trichocarpa
Potri.001G194400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 17841569-17842568 Populus trichocarpa
Potri.001G194400 1.0kb downstream 1.0kb downstream 2497 true Chr01: 17839072-17841568 Populus trichocarpa
Potri.001G194400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 17839072-17840071 Populus trichocarpa
Potri.001G194400 2.0kb upstream 2.0kb upstream 3497 true Chr01: 17840072-17843568 Populus trichocarpa
Potri.001G194400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 17841569-17843568 Populus trichocarpa
Potri.001G194400 2.0kb downstream 2.0kb downstream 3497 true Chr01: 17838072-17841568 Populus trichocarpa
Potri.001G194400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 17838072-17840071 Populus trichocarpa
Potri.001G194400 5.0kb upstream 5.0kb upstream 6497 true Chr01: 17840072-17846568 Populus trichocarpa
Potri.001G194400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 17841569-17846568 Populus trichocarpa
Potri.001G194400 5.0kb downstream 5.0kb downstream 6497 true Chr01: 17835072-17841568 Populus trichocarpa
Potri.001G194400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 17835072-17840071 Populus trichocarpa
Potri.001G194400 10.0kb upstream 10.0kb upstream 11497 true Chr01: 17840072-17851568 Populus trichocarpa
Potri.001G194400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 17841569-17851568 Populus trichocarpa
Potri.001G194400 10.0kb downstream 10.0kb downstream 11497 true Chr01: 17830072-17841568 Populus trichocarpa
Potri.001G194400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 17830072-17840071 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453098 5262 Malpighiales View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain