Gene : Potri.001G184000 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR10744:SF7 - 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Genomic Order:  1903
Name:  ? Potri.001G184000 Secondary Identifier:  ? PAC:37280313
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G184000 0.5kb upstream 0.5kb upstream 4171 true Chr01: 16101379-16105549 Populus trichocarpa
Potri.001G184000 0.5kb upstream 0.5kb upstream 500 false Chr01: 16101379-16101878 Populus trichocarpa
Potri.001G184000 0.5kb downstream 0.5kb downstream 4171 true Chr01: 16101879-16106049 Populus trichocarpa
Potri.001G184000 0.5kb downstream 0.5kb downstream 500 false Chr01: 16105550-16106049 Populus trichocarpa
Potri.001G184000 1.0kb upstream 1.0kb upstream 4671 true Chr01: 16100879-16105549 Populus trichocarpa
Potri.001G184000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16100879-16101878 Populus trichocarpa
Potri.001G184000 1.0kb downstream 1.0kb downstream 4671 true Chr01: 16101879-16106549 Populus trichocarpa
Potri.001G184000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16105550-16106549 Populus trichocarpa
Potri.001G184000 2.0kb upstream 2.0kb upstream 5671 true Chr01: 16099879-16105549 Populus trichocarpa
Potri.001G184000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16099879-16101878 Populus trichocarpa
Potri.001G184000 2.0kb downstream 2.0kb downstream 5671 true Chr01: 16101879-16107549 Populus trichocarpa
Potri.001G184000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16105550-16107549 Populus trichocarpa
Potri.001G184000 5.0kb upstream 5.0kb upstream 8671 true Chr01: 16096879-16105549 Populus trichocarpa
Potri.001G184000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16096879-16101878 Populus trichocarpa
Potri.001G184000 5.0kb downstream 5.0kb downstream 8671 true Chr01: 16101879-16110549 Populus trichocarpa
Potri.001G184000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16105550-16110549 Populus trichocarpa
Potri.001G184000 10.0kb upstream 10.0kb upstream 13671 true Chr01: 16091879-16105549 Populus trichocarpa
Potri.001G184000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16091879-16101878 Populus trichocarpa
Potri.001G184000 10.0kb downstream 10.0kb downstream 13671 true Chr01: 16101879-16115549 Populus trichocarpa
Potri.001G184000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16105550-16115549 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450923 5262 Malpighiales View MSA
124253303 5268 Malvidae View MSA
124063542 5270 Rosid View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain