Gene : Potri.001G171100 P. trichocarpa v3.1
Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  1768
Name:  ? Potri.001G171100 Secondary Identifier:  ? PAC:37274598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G171100 0.5kb upstream 0.5kb upstream 7641 true Chr01: 14514971-14522611 Populus trichocarpa
Potri.001G171100 0.5kb upstream 0.5kb upstream 500 false Chr01: 14514971-14515470 Populus trichocarpa
Potri.001G171100 0.5kb downstream 0.5kb downstream 7641 true Chr01: 14515471-14523111 Populus trichocarpa
Potri.001G171100 0.5kb downstream 0.5kb downstream 500 false Chr01: 14522612-14523111 Populus trichocarpa
Potri.001G171100 1.0kb upstream 1.0kb upstream 8141 true Chr01: 14514471-14522611 Populus trichocarpa
Potri.001G171100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 14514471-14515470 Populus trichocarpa
Potri.001G171100 1.0kb downstream 1.0kb downstream 8141 true Chr01: 14515471-14523611 Populus trichocarpa
Potri.001G171100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 14522612-14523611 Populus trichocarpa
Potri.001G171100 2.0kb upstream 2.0kb upstream 9141 true Chr01: 14513471-14522611 Populus trichocarpa
Potri.001G171100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 14513471-14515470 Populus trichocarpa
Potri.001G171100 2.0kb downstream 2.0kb downstream 9141 true Chr01: 14515471-14524611 Populus trichocarpa
Potri.001G171100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 14522612-14524611 Populus trichocarpa
Potri.001G171100 5.0kb upstream 5.0kb upstream 12141 true Chr01: 14510471-14522611 Populus trichocarpa
Potri.001G171100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 14510471-14515470 Populus trichocarpa
Potri.001G171100 5.0kb downstream 5.0kb downstream 12141 true Chr01: 14515471-14527611 Populus trichocarpa
Potri.001G171100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 14522612-14527611 Populus trichocarpa
Potri.001G171100 10.0kb upstream 10.0kb upstream 17141 true Chr01: 14505471-14522611 Populus trichocarpa
Potri.001G171100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 14505471-14515470 Populus trichocarpa
Potri.001G171100 10.0kb downstream 10.0kb downstream 17141 true Chr01: 14515471-14532611 Populus trichocarpa
Potri.001G171100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 14522612-14532611 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461997 5262 Malpighiales View MSA
124239870 5268 Malvidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain