Gene : Potri.001G157500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10201//PTHR10201:SF141 - MATRIX METALLOPROTEINASE // PROTEIN H19M22.3, ISOFORM A Genomic Order:  1631
Name:  ? Potri.001G157500 Secondary Identifier:  ? PAC:37275461
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G157500 0.5kb upstream 0.5kb upstream 1741 true Chr01: 13079521-13081261 Populus trichocarpa
Potri.001G157500 0.5kb upstream 0.5kb upstream 500 false Chr01: 13079521-13080020 Populus trichocarpa
Potri.001G157500 0.5kb downstream 0.5kb downstream 1741 true Chr01: 13080021-13081761 Populus trichocarpa
Potri.001G157500 0.5kb downstream 0.5kb downstream 500 false Chr01: 13081262-13081761 Populus trichocarpa
Potri.001G157500 1.0kb upstream 1.0kb upstream 2241 true Chr01: 13079021-13081261 Populus trichocarpa
Potri.001G157500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13079021-13080020 Populus trichocarpa
Potri.001G157500 1.0kb downstream 1.0kb downstream 2241 true Chr01: 13080021-13082261 Populus trichocarpa
Potri.001G157500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13081262-13082261 Populus trichocarpa
Potri.001G157500 2.0kb upstream 2.0kb upstream 3241 true Chr01: 13078021-13081261 Populus trichocarpa
Potri.001G157500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13078021-13080020 Populus trichocarpa
Potri.001G157500 2.0kb downstream 2.0kb downstream 3241 true Chr01: 13080021-13083261 Populus trichocarpa
Potri.001G157500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13081262-13083261 Populus trichocarpa
Potri.001G157500 5.0kb upstream 5.0kb upstream 6241 true Chr01: 13075021-13081261 Populus trichocarpa
Potri.001G157500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13075021-13080020 Populus trichocarpa
Potri.001G157500 5.0kb downstream 5.0kb downstream 6241 true Chr01: 13080021-13086261 Populus trichocarpa
Potri.001G157500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13081262-13086261 Populus trichocarpa
Potri.001G157500 10.0kb upstream 10.0kb upstream 11241 true Chr01: 13070021-13081261 Populus trichocarpa
Potri.001G157500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13070021-13080020 Populus trichocarpa
Potri.001G157500 10.0kb downstream 10.0kb downstream 11241 true Chr01: 13080021-13091261 Populus trichocarpa
Potri.001G157500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13081262-13091261 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457671 5262 Malpighiales View MSA
124244259 5268 Malvidae View MSA
124070256 5270 Rosid View MSA
123748450 5271 Pentapetalae View MSA
122786815 5272 Eudicot View MSA
122041842 5273 Angiosperm View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain