Gene : Potri.001G162400 P. trichocarpa v3.1
Defline:  (1 of 56) K01051 - pectinesterase (E3.1.1.11) Genomic Order:  1680
Name:  ? Potri.001G162400 Secondary Identifier:  ? PAC:37278566
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G162400 0.5kb upstream 0.5kb upstream 5835 true Chr01: 13571580-13577414 Populus trichocarpa
Potri.001G162400 0.5kb upstream 0.5kb upstream 500 false Chr01: 13571580-13572079 Populus trichocarpa
Potri.001G162400 0.5kb downstream 0.5kb downstream 5835 true Chr01: 13572080-13577914 Populus trichocarpa
Potri.001G162400 0.5kb downstream 0.5kb downstream 500 false Chr01: 13577415-13577914 Populus trichocarpa
Potri.001G162400 1.0kb upstream 1.0kb upstream 6335 true Chr01: 13571080-13577414 Populus trichocarpa
Potri.001G162400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 13571080-13572079 Populus trichocarpa
Potri.001G162400 1.0kb downstream 1.0kb downstream 6335 true Chr01: 13572080-13578414 Populus trichocarpa
Potri.001G162400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 13577415-13578414 Populus trichocarpa
Potri.001G162400 2.0kb upstream 2.0kb upstream 7335 true Chr01: 13570080-13577414 Populus trichocarpa
Potri.001G162400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 13570080-13572079 Populus trichocarpa
Potri.001G162400 2.0kb downstream 2.0kb downstream 7335 true Chr01: 13572080-13579414 Populus trichocarpa
Potri.001G162400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 13577415-13579414 Populus trichocarpa
Potri.001G162400 5.0kb upstream 5.0kb upstream 10335 true Chr01: 13567080-13577414 Populus trichocarpa
Potri.001G162400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 13567080-13572079 Populus trichocarpa
Potri.001G162400 5.0kb downstream 5.0kb downstream 10335 true Chr01: 13572080-13582414 Populus trichocarpa
Potri.001G162400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 13577415-13582414 Populus trichocarpa
Potri.001G162400 10.0kb upstream 10.0kb upstream 15335 true Chr01: 13562080-13577414 Populus trichocarpa
Potri.001G162400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 13562080-13572079 Populus trichocarpa
Potri.001G162400 10.0kb downstream 10.0kb downstream 15335 true Chr01: 13572080-13587414 Populus trichocarpa
Potri.001G162400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 13577415-13587414 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464350 5262 Malpighiales View MSA
124246887 5268 Malvidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain