Gene : Potri.001G150400 P. trichocarpa v3.1

Defline:  (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF) Genomic Order:  1557
Name:  ? Potri.001G150400 Secondary Identifier:  ? PAC:37277533

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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G150400 0.5kb upstream 0.5kb upstream 5666 true Chr01: 12392588-12398253 Populus trichocarpa
Potri.001G150400 0.5kb upstream 0.5kb upstream 500 false Chr01: 12392588-12393087 Populus trichocarpa
Potri.001G150400 0.5kb downstream 0.5kb downstream 5666 true Chr01: 12393088-12398753 Populus trichocarpa
Potri.001G150400 0.5kb downstream 0.5kb downstream 500 false Chr01: 12398254-12398753 Populus trichocarpa
Potri.001G150400 1.0kb upstream 1.0kb upstream 6166 true Chr01: 12392088-12398253 Populus trichocarpa
Potri.001G150400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12392088-12393087 Populus trichocarpa
Potri.001G150400 1.0kb downstream 1.0kb downstream 6166 true Chr01: 12393088-12399253 Populus trichocarpa
Potri.001G150400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12398254-12399253 Populus trichocarpa
Potri.001G150400 2.0kb upstream 2.0kb upstream 7166 true Chr01: 12391088-12398253 Populus trichocarpa
Potri.001G150400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12391088-12393087 Populus trichocarpa
Potri.001G150400 2.0kb downstream 2.0kb downstream 7166 true Chr01: 12393088-12400253 Populus trichocarpa
Potri.001G150400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12398254-12400253 Populus trichocarpa
Potri.001G150400 5.0kb upstream 5.0kb upstream 10166 true Chr01: 12388088-12398253 Populus trichocarpa
Potri.001G150400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12388088-12393087 Populus trichocarpa
Potri.001G150400 5.0kb downstream 5.0kb downstream 10166 true Chr01: 12393088-12403253 Populus trichocarpa
Potri.001G150400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12398254-12403253 Populus trichocarpa
Potri.001G150400 10.0kb upstream 10.0kb upstream 15166 true Chr01: 12383088-12398253 Populus trichocarpa
Potri.001G150400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12383088-12393087 Populus trichocarpa
Potri.001G150400 10.0kb downstream 10.0kb downstream 15166 true Chr01: 12393088-12408253 Populus trichocarpa
Potri.001G150400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12398254-12408253 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
122448554 5262 Malpighiales View MSA
124239981 5268 Malvidae View MSA
124065772 5270 Rosid View MSA
123749861 5271 Pentapetalae View MSA
122792541 5272 Eudicot View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain