Gene : Potri.001G153300 P. trichocarpa v3.1
Defline:  (1 of 2) 4.2.1.18 - Methylglutaconyl-CoA hydratase Genomic Order:  1587
Name:  ? Potri.001G153300 Secondary Identifier:  ? PAC:37278549
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa LEU-DEG2-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G153300 0.5kb upstream 0.5kb upstream 4517 true Chr01: 12655668-12660184 Populus trichocarpa
Potri.001G153300 0.5kb upstream 0.5kb upstream 500 false Chr01: 12655668-12656167 Populus trichocarpa
Potri.001G153300 0.5kb downstream 0.5kb downstream 4517 true Chr01: 12656168-12660684 Populus trichocarpa
Potri.001G153300 0.5kb downstream 0.5kb downstream 500 false Chr01: 12660185-12660684 Populus trichocarpa
Potri.001G153300 1.0kb upstream 1.0kb upstream 5017 true Chr01: 12655168-12660184 Populus trichocarpa
Potri.001G153300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12655168-12656167 Populus trichocarpa
Potri.001G153300 1.0kb downstream 1.0kb downstream 5017 true Chr01: 12656168-12661184 Populus trichocarpa
Potri.001G153300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12660185-12661184 Populus trichocarpa
Potri.001G153300 2.0kb upstream 2.0kb upstream 6017 true Chr01: 12654168-12660184 Populus trichocarpa
Potri.001G153300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12654168-12656167 Populus trichocarpa
Potri.001G153300 2.0kb downstream 2.0kb downstream 6017 true Chr01: 12656168-12662184 Populus trichocarpa
Potri.001G153300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12660185-12662184 Populus trichocarpa
Potri.001G153300 5.0kb upstream 5.0kb upstream 9017 true Chr01: 12651168-12660184 Populus trichocarpa
Potri.001G153300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12651168-12656167 Populus trichocarpa
Potri.001G153300 5.0kb downstream 5.0kb downstream 9017 true Chr01: 12656168-12665184 Populus trichocarpa
Potri.001G153300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12660185-12665184 Populus trichocarpa
Potri.001G153300 10.0kb upstream 10.0kb upstream 14017 true Chr01: 12646168-12660184 Populus trichocarpa
Potri.001G153300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12646168-12656167 Populus trichocarpa
Potri.001G153300 10.0kb downstream 10.0kb downstream 14017 true Chr01: 12656168-12670184 Populus trichocarpa
Potri.001G153300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12660185-12670184 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455093 5262 Malpighiales View MSA
124240745 5268 Malvidae View MSA
124069005 5270 Rosid View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain