Gene : Potri.001G253300 P. trichocarpa v3.1
Defline:  (1 of 1) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT) Genomic Order:  2617
Name:  ? Potri.001G253300 Secondary Identifier:  ? PAC:37280440
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYSYN-ALA-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G253300 0.5kb upstream 0.5kb upstream 5620 true Chr01: 26301045-26306664 Populus trichocarpa
Potri.001G253300 0.5kb upstream 0.5kb upstream 500 false Chr01: 26306165-26306664 Populus trichocarpa
Potri.001G253300 0.5kb downstream 0.5kb downstream 5620 true Chr01: 26300545-26306164 Populus trichocarpa
Potri.001G253300 0.5kb downstream 0.5kb downstream 500 false Chr01: 26300545-26301044 Populus trichocarpa
Potri.001G253300 1.0kb upstream 1.0kb upstream 6120 true Chr01: 26301045-26307164 Populus trichocarpa
Potri.001G253300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26306165-26307164 Populus trichocarpa
Potri.001G253300 1.0kb downstream 1.0kb downstream 6120 true Chr01: 26300045-26306164 Populus trichocarpa
Potri.001G253300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26300045-26301044 Populus trichocarpa
Potri.001G253300 2.0kb upstream 2.0kb upstream 7120 true Chr01: 26301045-26308164 Populus trichocarpa
Potri.001G253300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26306165-26308164 Populus trichocarpa
Potri.001G253300 2.0kb downstream 2.0kb downstream 7120 true Chr01: 26299045-26306164 Populus trichocarpa
Potri.001G253300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26299045-26301044 Populus trichocarpa
Potri.001G253300 5.0kb upstream 5.0kb upstream 10120 true Chr01: 26301045-26311164 Populus trichocarpa
Potri.001G253300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26306165-26311164 Populus trichocarpa
Potri.001G253300 5.0kb downstream 5.0kb downstream 10120 true Chr01: 26296045-26306164 Populus trichocarpa
Potri.001G253300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26296045-26301044 Populus trichocarpa
Potri.001G253300 10.0kb upstream 10.0kb upstream 15120 true Chr01: 26301045-26316164 Populus trichocarpa
Potri.001G253300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26306165-26316164 Populus trichocarpa
Potri.001G253300 10.0kb downstream 10.0kb downstream 15120 true Chr01: 26291045-26306164 Populus trichocarpa
Potri.001G253300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26291045-26301044 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464134 5262 Malpighiales View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain