Gene : Potri.001G254500 P. trichocarpa v3.1
Defline:  (1 of 4) K06688 - ubiquitin-conjugating enzyme E2 C (UBE2C, UBC11) Genomic Order:  2629
Name:  ? Potri.001G254500 Secondary Identifier:  ? PAC:37273544
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G254500 0.5kb upstream 0.5kb upstream 3092 true Chr01: 26430972-26434063 Populus trichocarpa
Potri.001G254500 0.5kb upstream 0.5kb upstream 500 false Chr01: 26430972-26431471 Populus trichocarpa
Potri.001G254500 0.5kb downstream 0.5kb downstream 3092 true Chr01: 26431472-26434563 Populus trichocarpa
Potri.001G254500 0.5kb downstream 0.5kb downstream 500 false Chr01: 26434064-26434563 Populus trichocarpa
Potri.001G254500 1.0kb upstream 1.0kb upstream 3592 true Chr01: 26430472-26434063 Populus trichocarpa
Potri.001G254500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 26430472-26431471 Populus trichocarpa
Potri.001G254500 1.0kb downstream 1.0kb downstream 3592 true Chr01: 26431472-26435063 Populus trichocarpa
Potri.001G254500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 26434064-26435063 Populus trichocarpa
Potri.001G254500 2.0kb upstream 2.0kb upstream 4592 true Chr01: 26429472-26434063 Populus trichocarpa
Potri.001G254500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 26429472-26431471 Populus trichocarpa
Potri.001G254500 2.0kb downstream 2.0kb downstream 4592 true Chr01: 26431472-26436063 Populus trichocarpa
Potri.001G254500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 26434064-26436063 Populus trichocarpa
Potri.001G254500 5.0kb upstream 5.0kb upstream 7592 true Chr01: 26426472-26434063 Populus trichocarpa
Potri.001G254500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 26426472-26431471 Populus trichocarpa
Potri.001G254500 5.0kb downstream 5.0kb downstream 7592 true Chr01: 26431472-26439063 Populus trichocarpa
Potri.001G254500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 26434064-26439063 Populus trichocarpa
Potri.001G254500 10.0kb upstream 10.0kb upstream 12592 true Chr01: 26421472-26434063 Populus trichocarpa
Potri.001G254500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 26421472-26431471 Populus trichocarpa
Potri.001G254500 10.0kb downstream 10.0kb downstream 12592 true Chr01: 26431472-26444063 Populus trichocarpa
Potri.001G254500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 26434064-26444063 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458218 5262 Malpighiales View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain