Gene : Potri.001G242600 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR24286:SF86 - ABSCISIC ACID 8'-HYDROXYLASE 2 Genomic Order:  2503
Name:  ? Potri.001G242600 Secondary Identifier:  ? PAC:37279900

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5271 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G242600 0.5kb upstream 0.5kb upstream 6812 true Chr01: 25372661-25379472 Populus trichocarpa
Potri.001G242600 0.5kb upstream 0.5kb upstream 500 false Chr01: 25378973-25379472 Populus trichocarpa
Potri.001G242600 0.5kb downstream 0.5kb downstream 6812 true Chr01: 25372161-25378972 Populus trichocarpa
Potri.001G242600 0.5kb downstream 0.5kb downstream 500 false Chr01: 25372161-25372660 Populus trichocarpa
Potri.001G242600 1.0kb upstream 1.0kb upstream 7312 true Chr01: 25372661-25379972 Populus trichocarpa
Potri.001G242600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 25378973-25379972 Populus trichocarpa
Potri.001G242600 1.0kb downstream 1.0kb downstream 7312 true Chr01: 25371661-25378972 Populus trichocarpa
Potri.001G242600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 25371661-25372660 Populus trichocarpa
Potri.001G242600 2.0kb upstream 2.0kb upstream 8312 true Chr01: 25372661-25380972 Populus trichocarpa
Potri.001G242600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 25378973-25380972 Populus trichocarpa
Potri.001G242600 2.0kb downstream 2.0kb downstream 8312 true Chr01: 25370661-25378972 Populus trichocarpa
Potri.001G242600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 25370661-25372660 Populus trichocarpa
Potri.001G242600 5.0kb upstream 5.0kb upstream 11312 true Chr01: 25372661-25383972 Populus trichocarpa
Potri.001G242600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 25378973-25383972 Populus trichocarpa
Potri.001G242600 5.0kb downstream 5.0kb downstream 11312 true Chr01: 25367661-25378972 Populus trichocarpa
Potri.001G242600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 25367661-25372660 Populus trichocarpa
Potri.001G242600 10.0kb upstream 10.0kb upstream 16312 true Chr01: 25372661-25388972 Populus trichocarpa
Potri.001G242600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 25378973-25388972 Populus trichocarpa
Potri.001G242600 10.0kb downstream 10.0kb downstream 16312 true Chr01: 25362661-25378972 Populus trichocarpa
Potri.001G242600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 25362661-25372660 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410751 5262 Malpighiales View MSA
124242424 5268 Malvidae View MSA
124067645 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain