Gene : Potri.001G223700 P. trichocarpa v3.1

Defline:  (1 of 5) 3.2.1.117//3.2.1.21 - Amygdalin beta-glucosidase // Beta-glucosidase / Gentobiase Genomic Order:  2305
Name:  ? Potri.001G223700 Secondary Identifier:  ? PAC:37279520

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5176 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7089 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7091 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7092 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G223700 0.5kb upstream 0.5kb upstream 4282 true Chr01: 23319389-23323670 Populus trichocarpa
Potri.001G223700 0.5kb upstream 0.5kb upstream 500 false Chr01: 23323171-23323670 Populus trichocarpa
Potri.001G223700 0.5kb downstream 0.5kb downstream 4282 true Chr01: 23318889-23323170 Populus trichocarpa
Potri.001G223700 0.5kb downstream 0.5kb downstream 500 false Chr01: 23318889-23319388 Populus trichocarpa
Potri.001G223700 1.0kb upstream 1.0kb upstream 4782 true Chr01: 23319389-23324170 Populus trichocarpa
Potri.001G223700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23323171-23324170 Populus trichocarpa
Potri.001G223700 1.0kb downstream 1.0kb downstream 4782 true Chr01: 23318389-23323170 Populus trichocarpa
Potri.001G223700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23318389-23319388 Populus trichocarpa
Potri.001G223700 2.0kb upstream 2.0kb upstream 5782 true Chr01: 23319389-23325170 Populus trichocarpa
Potri.001G223700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23323171-23325170 Populus trichocarpa
Potri.001G223700 2.0kb downstream 2.0kb downstream 5782 true Chr01: 23317389-23323170 Populus trichocarpa
Potri.001G223700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23317389-23319388 Populus trichocarpa
Potri.001G223700 5.0kb upstream 5.0kb upstream 8782 true Chr01: 23319389-23328170 Populus trichocarpa
Potri.001G223700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23323171-23328170 Populus trichocarpa
Potri.001G223700 5.0kb downstream 5.0kb downstream 8782 true Chr01: 23314389-23323170 Populus trichocarpa
Potri.001G223700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23314389-23319388 Populus trichocarpa
Potri.001G223700 10.0kb upstream 10.0kb upstream 13782 true Chr01: 23319389-23333170 Populus trichocarpa
Potri.001G223700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23323171-23333170 Populus trichocarpa
Potri.001G223700 10.0kb downstream 10.0kb downstream 13782 true Chr01: 23309389-23323170 Populus trichocarpa
Potri.001G223700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23309389-23319388 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784895 5273 Angiosperm View MSA
122401524 5262 Malpighiales View MSA
124255720 5268 Malvidae View MSA
123953271 5270 Rosid View MSA
123757098 5271 Pentapetalae View MSA
122778172 5272 Eudicot View MSA
121056296 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain