Gene : Potri.001G225400 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR10252:SF36 - HISTONE SUPERFAMILY PROTEIN Genomic Order:  2321
Name:  ? Potri.001G225400 Secondary Identifier:  ? PAC:37279987

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G225400 0.5kb upstream 0.5kb upstream 5374 true Chr01: 23594592-23599965 Populus trichocarpa
Potri.001G225400 0.5kb upstream 0.5kb upstream 500 false Chr01: 23594592-23595091 Populus trichocarpa
Potri.001G225400 0.5kb downstream 0.5kb downstream 5374 true Chr01: 23595092-23600465 Populus trichocarpa
Potri.001G225400 0.5kb downstream 0.5kb downstream 500 false Chr01: 23599966-23600465 Populus trichocarpa
Potri.001G225400 1.0kb upstream 1.0kb upstream 5874 true Chr01: 23594092-23599965 Populus trichocarpa
Potri.001G225400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23594092-23595091 Populus trichocarpa
Potri.001G225400 1.0kb downstream 1.0kb downstream 5874 true Chr01: 23595092-23600965 Populus trichocarpa
Potri.001G225400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23599966-23600965 Populus trichocarpa
Potri.001G225400 2.0kb upstream 2.0kb upstream 6874 true Chr01: 23593092-23599965 Populus trichocarpa
Potri.001G225400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23593092-23595091 Populus trichocarpa
Potri.001G225400 2.0kb downstream 2.0kb downstream 6874 true Chr01: 23595092-23601965 Populus trichocarpa
Potri.001G225400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23599966-23601965 Populus trichocarpa
Potri.001G225400 5.0kb upstream 5.0kb upstream 9874 true Chr01: 23590092-23599965 Populus trichocarpa
Potri.001G225400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23590092-23595091 Populus trichocarpa
Potri.001G225400 5.0kb downstream 5.0kb downstream 9874 true Chr01: 23595092-23604965 Populus trichocarpa
Potri.001G225400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23599966-23604965 Populus trichocarpa
Potri.001G225400 10.0kb upstream 10.0kb upstream 14874 true Chr01: 23585092-23599965 Populus trichocarpa
Potri.001G225400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23585092-23595091 Populus trichocarpa
Potri.001G225400 10.0kb downstream 10.0kb downstream 14874 true Chr01: 23595092-23609965 Populus trichocarpa
Potri.001G225400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23599966-23609965 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457262 5262 Malpighiales View MSA
124247913 5268 Malvidae View MSA
124069286 5270 Rosid View MSA
123742462 5271 Pentapetalae View MSA
122792661 5272 Eudicot View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain