Gene : Potri.001G211400 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR31561//PTHR31561:SF20 - FAMILY NOT NAMED // 3-KETOACYL-COA SYNTHASE 7 Genomic Order:  2177
Name:  ? Potri.001G211400 Secondary Identifier:  ? PAC:37277963

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5080 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6433 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6598 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7601 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7619 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G211400 0.5kb upstream 0.5kb upstream 1872 true Chr01: 21193528-21195399 Populus trichocarpa
Potri.001G211400 0.5kb upstream 0.5kb upstream 500 false Chr01: 21194900-21195399 Populus trichocarpa
Potri.001G211400 0.5kb downstream 0.5kb downstream 1872 true Chr01: 21193028-21194899 Populus trichocarpa
Potri.001G211400 0.5kb downstream 0.5kb downstream 500 false Chr01: 21193028-21193527 Populus trichocarpa
Potri.001G211400 1.0kb upstream 1.0kb upstream 2372 true Chr01: 21193528-21195899 Populus trichocarpa
Potri.001G211400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21194900-21195899 Populus trichocarpa
Potri.001G211400 1.0kb downstream 1.0kb downstream 2372 true Chr01: 21192528-21194899 Populus trichocarpa
Potri.001G211400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21192528-21193527 Populus trichocarpa
Potri.001G211400 2.0kb upstream 2.0kb upstream 3372 true Chr01: 21193528-21196899 Populus trichocarpa
Potri.001G211400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21194900-21196899 Populus trichocarpa
Potri.001G211400 2.0kb downstream 2.0kb downstream 3372 true Chr01: 21191528-21194899 Populus trichocarpa
Potri.001G211400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21191528-21193527 Populus trichocarpa
Potri.001G211400 5.0kb upstream 5.0kb upstream 6372 true Chr01: 21193528-21199899 Populus trichocarpa
Potri.001G211400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21194900-21199899 Populus trichocarpa
Potri.001G211400 5.0kb downstream 5.0kb downstream 6372 true Chr01: 21188528-21194899 Populus trichocarpa
Potri.001G211400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21188528-21193527 Populus trichocarpa
Potri.001G211400 10.0kb upstream 10.0kb upstream 11372 true Chr01: 21193528-21204899 Populus trichocarpa
Potri.001G211400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21194900-21204899 Populus trichocarpa
Potri.001G211400 10.0kb downstream 10.0kb downstream 11372 true Chr01: 21183528-21194899 Populus trichocarpa
Potri.001G211400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21183528-21193527 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464308 5262 Malpighiales View MSA
124246070 5268 Malvidae View MSA
124068402 5270 Rosid View MSA
123736932 5271 Pentapetalae View MSA
122769883 5272 Eudicot View MSA
122042754 5273 Angiosperm View MSA
121310017 5274 Embryophyte View MSA
123347622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain