Gene : Potri.001G326300 P. trichocarpa v3.1

Defline:  (1 of 4) K15400 - omega-hydroxypalmitate O-feruloyl transferase (HHT1) Genomic Order:  3376
Name:  ? Potri.001G326300 Secondary Identifier:  ? PAC:37276843

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7120 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G326300 0.5kb upstream 0.5kb upstream 2805 true Chr01: 33016766-33019570 Populus trichocarpa
Potri.001G326300 0.5kb upstream 0.5kb upstream 500 false Chr01: 33019071-33019570 Populus trichocarpa
Potri.001G326300 0.5kb downstream 0.5kb downstream 2805 true Chr01: 33016266-33019070 Populus trichocarpa
Potri.001G326300 0.5kb downstream 0.5kb downstream 500 false Chr01: 33016266-33016765 Populus trichocarpa
Potri.001G326300 1.0kb upstream 1.0kb upstream 3305 true Chr01: 33016766-33020070 Populus trichocarpa
Potri.001G326300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33019071-33020070 Populus trichocarpa
Potri.001G326300 1.0kb downstream 1.0kb downstream 3305 true Chr01: 33015766-33019070 Populus trichocarpa
Potri.001G326300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33015766-33016765 Populus trichocarpa
Potri.001G326300 2.0kb upstream 2.0kb upstream 4305 true Chr01: 33016766-33021070 Populus trichocarpa
Potri.001G326300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33019071-33021070 Populus trichocarpa
Potri.001G326300 2.0kb downstream 2.0kb downstream 4305 true Chr01: 33014766-33019070 Populus trichocarpa
Potri.001G326300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33014766-33016765 Populus trichocarpa
Potri.001G326300 5.0kb upstream 5.0kb upstream 7305 true Chr01: 33016766-33024070 Populus trichocarpa
Potri.001G326300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33019071-33024070 Populus trichocarpa
Potri.001G326300 5.0kb downstream 5.0kb downstream 7305 true Chr01: 33011766-33019070 Populus trichocarpa
Potri.001G326300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33011766-33016765 Populus trichocarpa
Potri.001G326300 10.0kb upstream 10.0kb upstream 12305 true Chr01: 33016766-33029070 Populus trichocarpa
Potri.001G326300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33019071-33029070 Populus trichocarpa
Potri.001G326300 10.0kb downstream 10.0kb downstream 12305 true Chr01: 33006766-33019070 Populus trichocarpa
Potri.001G326300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33006766-33016765 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449771 5262 Malpighiales View MSA
124253253 5268 Malvidae View MSA
124066399 5270 Rosid View MSA
123738268 5271 Pentapetalae View MSA
122789238 5272 Eudicot View MSA
122045843 5273 Angiosperm View MSA
121350773 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain