Gene : Potri.001G329700 P. trichocarpa v3.1

Defline:  (1 of 3) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  3409
Name:  ? Potri.001G329700 Secondary Identifier:  ? PAC:37277733

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6545 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7210 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7220 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7222 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7226 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7227 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7228 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G329700 0.5kb upstream 0.5kb upstream 1966 true Chr01: 33344421-33346386 Populus trichocarpa
Potri.001G329700 0.5kb upstream 0.5kb upstream 500 false Chr01: 33345887-33346386 Populus trichocarpa
Potri.001G329700 0.5kb downstream 0.5kb downstream 1966 true Chr01: 33343921-33345886 Populus trichocarpa
Potri.001G329700 0.5kb downstream 0.5kb downstream 500 false Chr01: 33343921-33344420 Populus trichocarpa
Potri.001G329700 1.0kb upstream 1.0kb upstream 2466 true Chr01: 33344421-33346886 Populus trichocarpa
Potri.001G329700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 33345887-33346886 Populus trichocarpa
Potri.001G329700 1.0kb downstream 1.0kb downstream 2466 true Chr01: 33343421-33345886 Populus trichocarpa
Potri.001G329700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 33343421-33344420 Populus trichocarpa
Potri.001G329700 2.0kb upstream 2.0kb upstream 3466 true Chr01: 33344421-33347886 Populus trichocarpa
Potri.001G329700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 33345887-33347886 Populus trichocarpa
Potri.001G329700 2.0kb downstream 2.0kb downstream 3466 true Chr01: 33342421-33345886 Populus trichocarpa
Potri.001G329700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 33342421-33344420 Populus trichocarpa
Potri.001G329700 5.0kb upstream 5.0kb upstream 6466 true Chr01: 33344421-33350886 Populus trichocarpa
Potri.001G329700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 33345887-33350886 Populus trichocarpa
Potri.001G329700 5.0kb downstream 5.0kb downstream 6466 true Chr01: 33339421-33345886 Populus trichocarpa
Potri.001G329700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 33339421-33344420 Populus trichocarpa
Potri.001G329700 10.0kb upstream 10.0kb upstream 11466 true Chr01: 33344421-33355886 Populus trichocarpa
Potri.001G329700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 33345887-33355886 Populus trichocarpa
Potri.001G329700 10.0kb downstream 10.0kb downstream 11466 true Chr01: 33334421-33345886 Populus trichocarpa
Potri.001G329700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 33334421-33344420 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452781 5262 Malpighiales View MSA
124244448 5268 Malvidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain