Gene : Potri.001G289300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR11817//PTHR11817:SF21 - PYRUVATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  2995
Name:  ? Potri.001G289300 Secondary Identifier:  ? PAC:37279166

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G289300 0.5kb upstream 0.5kb upstream 5382 true Chr01: 29522249-29527630 Populus trichocarpa
Potri.001G289300 0.5kb upstream 0.5kb upstream 500 false Chr01: 29522249-29522748 Populus trichocarpa
Potri.001G289300 0.5kb downstream 0.5kb downstream 5382 true Chr01: 29522749-29528130 Populus trichocarpa
Potri.001G289300 0.5kb downstream 0.5kb downstream 500 false Chr01: 29527631-29528130 Populus trichocarpa
Potri.001G289300 1.0kb upstream 1.0kb upstream 5882 true Chr01: 29521749-29527630 Populus trichocarpa
Potri.001G289300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29521749-29522748 Populus trichocarpa
Potri.001G289300 1.0kb downstream 1.0kb downstream 5882 true Chr01: 29522749-29528630 Populus trichocarpa
Potri.001G289300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29527631-29528630 Populus trichocarpa
Potri.001G289300 2.0kb upstream 2.0kb upstream 6882 true Chr01: 29520749-29527630 Populus trichocarpa
Potri.001G289300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29520749-29522748 Populus trichocarpa
Potri.001G289300 2.0kb downstream 2.0kb downstream 6882 true Chr01: 29522749-29529630 Populus trichocarpa
Potri.001G289300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29527631-29529630 Populus trichocarpa
Potri.001G289300 5.0kb upstream 5.0kb upstream 9882 true Chr01: 29517749-29527630 Populus trichocarpa
Potri.001G289300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29517749-29522748 Populus trichocarpa
Potri.001G289300 5.0kb downstream 5.0kb downstream 9882 true Chr01: 29522749-29532630 Populus trichocarpa
Potri.001G289300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29527631-29532630 Populus trichocarpa
Potri.001G289300 10.0kb upstream 10.0kb upstream 14882 true Chr01: 29512749-29527630 Populus trichocarpa
Potri.001G289300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29512749-29522748 Populus trichocarpa
Potri.001G289300 10.0kb downstream 10.0kb downstream 14882 true Chr01: 29522749-29537630 Populus trichocarpa
Potri.001G289300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29527631-29537630 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454082 5262 Malpighiales View MSA
124248777 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain