Gene : Potri.001G289000 P. trichocarpa v3.1
Defline:  (1 of 4) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  2992
Name:  ? Potri.001G289000 Secondary Identifier:  ? PAC:37276211
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G289000 0.5kb upstream 0.5kb upstream 6601 true Chr01: 29440351-29446951 Populus trichocarpa
Potri.001G289000 0.5kb upstream 0.5kb upstream 500 false Chr01: 29446452-29446951 Populus trichocarpa
Potri.001G289000 0.5kb downstream 0.5kb downstream 6601 true Chr01: 29439851-29446451 Populus trichocarpa
Potri.001G289000 0.5kb downstream 0.5kb downstream 500 false Chr01: 29439851-29440350 Populus trichocarpa
Potri.001G289000 1.0kb upstream 1.0kb upstream 7101 true Chr01: 29440351-29447451 Populus trichocarpa
Potri.001G289000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29446452-29447451 Populus trichocarpa
Potri.001G289000 1.0kb downstream 1.0kb downstream 7101 true Chr01: 29439351-29446451 Populus trichocarpa
Potri.001G289000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29439351-29440350 Populus trichocarpa
Potri.001G289000 2.0kb upstream 2.0kb upstream 8101 true Chr01: 29440351-29448451 Populus trichocarpa
Potri.001G289000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29446452-29448451 Populus trichocarpa
Potri.001G289000 2.0kb downstream 2.0kb downstream 8101 true Chr01: 29438351-29446451 Populus trichocarpa
Potri.001G289000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29438351-29440350 Populus trichocarpa
Potri.001G289000 5.0kb upstream 5.0kb upstream 11101 true Chr01: 29440351-29451451 Populus trichocarpa
Potri.001G289000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29446452-29451451 Populus trichocarpa
Potri.001G289000 5.0kb downstream 5.0kb downstream 11101 true Chr01: 29435351-29446451 Populus trichocarpa
Potri.001G289000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29435351-29440350 Populus trichocarpa
Potri.001G289000 10.0kb upstream 10.0kb upstream 16101 true Chr01: 29440351-29456451 Populus trichocarpa
Potri.001G289000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29446452-29456451 Populus trichocarpa
Potri.001G289000 10.0kb downstream 10.0kb downstream 16101 true Chr01: 29430351-29446451 Populus trichocarpa
Potri.001G289000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29430351-29440350 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457186 5262 Malpighiales View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain