Gene : Potri.001G271400 P. trichocarpa v3.1
Defline:  (1 of 1) KOG1028 - Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis Genomic Order:  2808
Name:  ? Potri.001G271400 Secondary Identifier:  ? PAC:37277272
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G271400 0.5kb upstream 0.5kb upstream 4175 true Chr01: 27903829-27908003 Populus trichocarpa
Potri.001G271400 0.5kb upstream 0.5kb upstream 500 false Chr01: 27903829-27904328 Populus trichocarpa
Potri.001G271400 0.5kb downstream 0.5kb downstream 4175 true Chr01: 27904329-27908503 Populus trichocarpa
Potri.001G271400 0.5kb downstream 0.5kb downstream 500 false Chr01: 27908004-27908503 Populus trichocarpa
Potri.001G271400 1.0kb upstream 1.0kb upstream 4675 true Chr01: 27903329-27908003 Populus trichocarpa
Potri.001G271400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27903329-27904328 Populus trichocarpa
Potri.001G271400 1.0kb downstream 1.0kb downstream 4675 true Chr01: 27904329-27909003 Populus trichocarpa
Potri.001G271400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27908004-27909003 Populus trichocarpa
Potri.001G271400 2.0kb upstream 2.0kb upstream 5675 true Chr01: 27902329-27908003 Populus trichocarpa
Potri.001G271400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27902329-27904328 Populus trichocarpa
Potri.001G271400 2.0kb downstream 2.0kb downstream 5675 true Chr01: 27904329-27910003 Populus trichocarpa
Potri.001G271400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27908004-27910003 Populus trichocarpa
Potri.001G271400 5.0kb upstream 5.0kb upstream 8675 true Chr01: 27899329-27908003 Populus trichocarpa
Potri.001G271400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27899329-27904328 Populus trichocarpa
Potri.001G271400 5.0kb downstream 5.0kb downstream 8675 true Chr01: 27904329-27913003 Populus trichocarpa
Potri.001G271400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27908004-27913003 Populus trichocarpa
Potri.001G271400 10.0kb upstream 10.0kb upstream 13675 true Chr01: 27894329-27908003 Populus trichocarpa
Potri.001G271400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27894329-27904328 Populus trichocarpa
Potri.001G271400 10.0kb downstream 10.0kb downstream 13675 true Chr01: 27904329-27918003 Populus trichocarpa
Potri.001G271400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27908004-27918003 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462175 5262 Malpighiales View MSA
124244476 5268 Malvidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain