Gene : Potri.001G273600 P. trichocarpa v3.1

Defline:  (1 of 2) K16912 - ribosomal biogenesis protein LAS1 (LAS1) Genomic Order:  2832
Name:  ? Potri.001G273600 Secondary Identifier:  ? PAC:37274957

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G273600 0.5kb upstream 0.5kb upstream 7114 true Chr01: 28022849-28029962 Populus trichocarpa
Potri.001G273600 0.5kb upstream 0.5kb upstream 500 false Chr01: 28022849-28023348 Populus trichocarpa
Potri.001G273600 0.5kb downstream 0.5kb downstream 7114 true Chr01: 28023349-28030462 Populus trichocarpa
Potri.001G273600 0.5kb downstream 0.5kb downstream 500 false Chr01: 28029963-28030462 Populus trichocarpa
Potri.001G273600 1.0kb upstream 1.0kb upstream 7614 true Chr01: 28022349-28029962 Populus trichocarpa
Potri.001G273600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 28022349-28023348 Populus trichocarpa
Potri.001G273600 1.0kb downstream 1.0kb downstream 7614 true Chr01: 28023349-28030962 Populus trichocarpa
Potri.001G273600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 28029963-28030962 Populus trichocarpa
Potri.001G273600 2.0kb upstream 2.0kb upstream 8614 true Chr01: 28021349-28029962 Populus trichocarpa
Potri.001G273600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 28021349-28023348 Populus trichocarpa
Potri.001G273600 2.0kb downstream 2.0kb downstream 8614 true Chr01: 28023349-28031962 Populus trichocarpa
Potri.001G273600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 28029963-28031962 Populus trichocarpa
Potri.001G273600 5.0kb upstream 5.0kb upstream 11614 true Chr01: 28018349-28029962 Populus trichocarpa
Potri.001G273600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 28018349-28023348 Populus trichocarpa
Potri.001G273600 5.0kb downstream 5.0kb downstream 11614 true Chr01: 28023349-28034962 Populus trichocarpa
Potri.001G273600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 28029963-28034962 Populus trichocarpa
Potri.001G273600 10.0kb upstream 10.0kb upstream 16614 true Chr01: 28013349-28029962 Populus trichocarpa
Potri.001G273600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 28013349-28023348 Populus trichocarpa
Potri.001G273600 10.0kb downstream 10.0kb downstream 16614 true Chr01: 28023349-28039962 Populus trichocarpa
Potri.001G273600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 28029963-28039962 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455357 5262 Malpighiales View MSA
124238799 5268 Malvidae View MSA
124060949 5270 Rosid View MSA
123737052 5271 Pentapetalae View MSA
122791609 5272 Eudicot View MSA
122045405 5273 Angiosperm View MSA
121348561 5274 Embryophyte View MSA
123425932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain