Gene : Potri.001G272400 P. trichocarpa v3.1
Defline:  similar to expressed protein in Arabidopsis thaliana; [ co-ortholog (1of3) of At5g12260, ] Genomic Order:  2819
Name:  ? Potri.001G272400 Secondary Identifier:  ? PAC:37278472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G272400 0.5kb upstream 0.5kb upstream 3487 true Chr01: 27960741-27964227 Populus trichocarpa
Potri.001G272400 0.5kb upstream 0.5kb upstream 500 false Chr01: 27960741-27961240 Populus trichocarpa
Potri.001G272400 0.5kb downstream 0.5kb downstream 3487 true Chr01: 27961241-27964727 Populus trichocarpa
Potri.001G272400 0.5kb downstream 0.5kb downstream 500 false Chr01: 27964228-27964727 Populus trichocarpa
Potri.001G272400 1.0kb upstream 1.0kb upstream 3987 true Chr01: 27960241-27964227 Populus trichocarpa
Potri.001G272400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 27960241-27961240 Populus trichocarpa
Potri.001G272400 1.0kb downstream 1.0kb downstream 3987 true Chr01: 27961241-27965227 Populus trichocarpa
Potri.001G272400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 27964228-27965227 Populus trichocarpa
Potri.001G272400 2.0kb upstream 2.0kb upstream 4987 true Chr01: 27959241-27964227 Populus trichocarpa
Potri.001G272400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 27959241-27961240 Populus trichocarpa
Potri.001G272400 2.0kb downstream 2.0kb downstream 4987 true Chr01: 27961241-27966227 Populus trichocarpa
Potri.001G272400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 27964228-27966227 Populus trichocarpa
Potri.001G272400 5.0kb upstream 5.0kb upstream 7987 true Chr01: 27956241-27964227 Populus trichocarpa
Potri.001G272400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 27956241-27961240 Populus trichocarpa
Potri.001G272400 5.0kb downstream 5.0kb downstream 7987 true Chr01: 27961241-27969227 Populus trichocarpa
Potri.001G272400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 27964228-27969227 Populus trichocarpa
Potri.001G272400 10.0kb upstream 10.0kb upstream 12987 true Chr01: 27951241-27964227 Populus trichocarpa
Potri.001G272400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 27951241-27961240 Populus trichocarpa
Potri.001G272400 10.0kb downstream 10.0kb downstream 12987 true Chr01: 27961241-27974227 Populus trichocarpa
Potri.001G272400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 27964228-27974227 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452491 5262 Malpighiales View MSA
124242157 5268 Malvidae View MSA
124067419 5270 Rosid View MSA
123741379 5271 Pentapetalae View MSA
122789225 5272 Eudicot View MSA
122047134 5273 Angiosperm View MSA
121347972 5274 Embryophyte View MSA
123380696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain