Gene : Potri.001G369200 P. trichocarpa v3.1

Defline:  (1 of 14) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  3811
Name:  ? Potri.001G369200 Secondary Identifier:  ? PAC:37280422

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G369200 0.5kb upstream 0.5kb upstream 6487 true Chr01: 38315129-38321615 Populus trichocarpa
Potri.001G369200 0.5kb upstream 0.5kb upstream 500 false Chr01: 38315129-38315628 Populus trichocarpa
Potri.001G369200 0.5kb downstream 0.5kb downstream 6487 true Chr01: 38315629-38322115 Populus trichocarpa
Potri.001G369200 0.5kb downstream 0.5kb downstream 500 false Chr01: 38321616-38322115 Populus trichocarpa
Potri.001G369200 1.0kb upstream 1.0kb upstream 6987 true Chr01: 38314629-38321615 Populus trichocarpa
Potri.001G369200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 38314629-38315628 Populus trichocarpa
Potri.001G369200 1.0kb downstream 1.0kb downstream 6987 true Chr01: 38315629-38322615 Populus trichocarpa
Potri.001G369200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 38321616-38322615 Populus trichocarpa
Potri.001G369200 2.0kb upstream 2.0kb upstream 7987 true Chr01: 38313629-38321615 Populus trichocarpa
Potri.001G369200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 38313629-38315628 Populus trichocarpa
Potri.001G369200 2.0kb downstream 2.0kb downstream 7987 true Chr01: 38315629-38323615 Populus trichocarpa
Potri.001G369200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 38321616-38323615 Populus trichocarpa
Potri.001G369200 5.0kb upstream 5.0kb upstream 10987 true Chr01: 38310629-38321615 Populus trichocarpa
Potri.001G369200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 38310629-38315628 Populus trichocarpa
Potri.001G369200 5.0kb downstream 5.0kb downstream 10987 true Chr01: 38315629-38326615 Populus trichocarpa
Potri.001G369200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 38321616-38326615 Populus trichocarpa
Potri.001G369200 10.0kb upstream 10.0kb upstream 15987 true Chr01: 38305629-38321615 Populus trichocarpa
Potri.001G369200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 38305629-38315628 Populus trichocarpa
Potri.001G369200 10.0kb downstream 10.0kb downstream 15987 true Chr01: 38315629-38331615 Populus trichocarpa
Potri.001G369200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 38321616-38331615 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450057 5262 Malpighiales View MSA
124244517 5268 Malvidae View MSA
124065828 5270 Rosid View MSA
123740930 5271 Pentapetalae View MSA
122786226 5272 Eudicot View MSA
122043167 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain