Gene : Potri.001G351800 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  3636
Name:  ? Potri.001G351800 Secondary Identifier:  ? PAC:37273887
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYCOGENSYNTH-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-622 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G351800 0.5kb upstream 0.5kb upstream 9934 true Chr01: 35898991-35908924 Populus trichocarpa
Potri.001G351800 0.5kb upstream 0.5kb upstream 500 false Chr01: 35908425-35908924 Populus trichocarpa
Potri.001G351800 0.5kb downstream 0.5kb downstream 9934 true Chr01: 35898491-35908424 Populus trichocarpa
Potri.001G351800 0.5kb downstream 0.5kb downstream 500 false Chr01: 35898491-35898990 Populus trichocarpa
Potri.001G351800 1.0kb upstream 1.0kb upstream 10434 true Chr01: 35898991-35909424 Populus trichocarpa
Potri.001G351800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35908425-35909424 Populus trichocarpa
Potri.001G351800 1.0kb downstream 1.0kb downstream 10434 true Chr01: 35897991-35908424 Populus trichocarpa
Potri.001G351800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35897991-35898990 Populus trichocarpa
Potri.001G351800 2.0kb upstream 2.0kb upstream 11434 true Chr01: 35898991-35910424 Populus trichocarpa
Potri.001G351800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35908425-35910424 Populus trichocarpa
Potri.001G351800 2.0kb downstream 2.0kb downstream 11434 true Chr01: 35896991-35908424 Populus trichocarpa
Potri.001G351800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35896991-35898990 Populus trichocarpa
Potri.001G351800 5.0kb upstream 5.0kb upstream 14434 true Chr01: 35898991-35913424 Populus trichocarpa
Potri.001G351800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35908425-35913424 Populus trichocarpa
Potri.001G351800 5.0kb downstream 5.0kb downstream 14434 true Chr01: 35893991-35908424 Populus trichocarpa
Potri.001G351800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35893991-35898990 Populus trichocarpa
Potri.001G351800 10.0kb upstream 10.0kb upstream 19434 true Chr01: 35898991-35918424 Populus trichocarpa
Potri.001G351800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35908425-35918424 Populus trichocarpa
Potri.001G351800 10.0kb downstream 10.0kb downstream 19434 true Chr01: 35888991-35908424 Populus trichocarpa
Potri.001G351800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35888991-35898990 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453603 5262 Malpighiales View MSA
124243663 5268 Malvidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain