Gene : Potri.001G453200 P. trichocarpa v3.1

Defline:  (1 of 3) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) Genomic Order:  4684
Name:  ? Potri.001G453200 Secondary Identifier:  ? PAC:37280303

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G453200 0.5kb upstream 0.5kb upstream 7406 true Chr01: 48819835-48827240 Populus trichocarpa
Potri.001G453200 0.5kb upstream 0.5kb upstream 500 false Chr01: 48819835-48820334 Populus trichocarpa
Potri.001G453200 0.5kb downstream 0.5kb downstream 7406 true Chr01: 48820335-48827740 Populus trichocarpa
Potri.001G453200 0.5kb downstream 0.5kb downstream 500 false Chr01: 48827241-48827740 Populus trichocarpa
Potri.001G453200 1.0kb upstream 1.0kb upstream 7906 true Chr01: 48819335-48827240 Populus trichocarpa
Potri.001G453200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 48819335-48820334 Populus trichocarpa
Potri.001G453200 1.0kb downstream 1.0kb downstream 7906 true Chr01: 48820335-48828240 Populus trichocarpa
Potri.001G453200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 48827241-48828240 Populus trichocarpa
Potri.001G453200 2.0kb upstream 2.0kb upstream 8906 true Chr01: 48818335-48827240 Populus trichocarpa
Potri.001G453200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 48818335-48820334 Populus trichocarpa
Potri.001G453200 2.0kb downstream 2.0kb downstream 8906 true Chr01: 48820335-48829240 Populus trichocarpa
Potri.001G453200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 48827241-48829240 Populus trichocarpa
Potri.001G453200 5.0kb upstream 5.0kb upstream 11906 true Chr01: 48815335-48827240 Populus trichocarpa
Potri.001G453200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 48815335-48820334 Populus trichocarpa
Potri.001G453200 5.0kb downstream 5.0kb downstream 11906 true Chr01: 48820335-48832240 Populus trichocarpa
Potri.001G453200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 48827241-48832240 Populus trichocarpa
Potri.001G453200 10.0kb upstream 10.0kb upstream 16906 true Chr01: 48810335-48827240 Populus trichocarpa
Potri.001G453200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 48810335-48820334 Populus trichocarpa
Potri.001G453200 10.0kb downstream 10.0kb downstream 16906 true Chr01: 48820335-48837240 Populus trichocarpa
Potri.001G453200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 48827241-48837240 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122413371 5262 Malpighiales View MSA
124207061 5268 Malvidae View MSA
123925825 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain