Gene : Potri.001G457100 P. trichocarpa v3.1
Defline:  (1 of 19) 1.10.3.9 - Photosystem II Genomic Order:  4725
Name:  ? Potri.001G457100 Secondary Identifier:  ? PAC:37274777
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G457100 0.5kb upstream 0.5kb upstream 2525 true Chr01: 49133757-49136281 Populus trichocarpa
Potri.001G457100 0.5kb upstream 0.5kb upstream 500 false Chr01: 49135782-49136281 Populus trichocarpa
Potri.001G457100 0.5kb downstream 0.5kb downstream 2525 true Chr01: 49133257-49135781 Populus trichocarpa
Potri.001G457100 0.5kb downstream 0.5kb downstream 500 false Chr01: 49133257-49133756 Populus trichocarpa
Potri.001G457100 1.0kb upstream 1.0kb upstream 3025 true Chr01: 49133757-49136781 Populus trichocarpa
Potri.001G457100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 49135782-49136781 Populus trichocarpa
Potri.001G457100 1.0kb downstream 1.0kb downstream 3025 true Chr01: 49132757-49135781 Populus trichocarpa
Potri.001G457100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 49132757-49133756 Populus trichocarpa
Potri.001G457100 2.0kb upstream 2.0kb upstream 4025 true Chr01: 49133757-49137781 Populus trichocarpa
Potri.001G457100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 49135782-49137781 Populus trichocarpa
Potri.001G457100 2.0kb downstream 2.0kb downstream 4025 true Chr01: 49131757-49135781 Populus trichocarpa
Potri.001G457100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 49131757-49133756 Populus trichocarpa
Potri.001G457100 5.0kb upstream 5.0kb upstream 7025 true Chr01: 49133757-49140781 Populus trichocarpa
Potri.001G457100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 49135782-49140781 Populus trichocarpa
Potri.001G457100 5.0kb downstream 5.0kb downstream 7025 true Chr01: 49128757-49135781 Populus trichocarpa
Potri.001G457100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 49128757-49133756 Populus trichocarpa
Potri.001G457100 10.0kb upstream 10.0kb upstream 12025 true Chr01: 49133757-49145781 Populus trichocarpa
Potri.001G457100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 49135782-49145781 Populus trichocarpa
Potri.001G457100 10.0kb downstream 10.0kb downstream 12025 true Chr01: 49123757-49135781 Populus trichocarpa
Potri.001G457100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 49123757-49133756 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122391844 5262 Malpighiales Singleton cluster - no MSA
124189471 5268 Malvidae Singleton cluster - no MSA
123910395 5270 Rosid Singleton cluster - no MSA
123753260 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain