Gene : Potri.001G430200 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR13312 - HIV-INDUCED PROTEIN-7-LIKE PROTEASE Genomic Order:  4446
Name:  ? Potri.001G430200 Secondary Identifier:  ? PAC:37276084
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G430200 0.5kb upstream 0.5kb upstream 4697 true Chr01: 46049832-46054528 Populus trichocarpa
Potri.001G430200 0.5kb upstream 0.5kb upstream 500 false Chr01: 46054029-46054528 Populus trichocarpa
Potri.001G430200 0.5kb downstream 0.5kb downstream 4697 true Chr01: 46049332-46054028 Populus trichocarpa
Potri.001G430200 0.5kb downstream 0.5kb downstream 500 false Chr01: 46049332-46049831 Populus trichocarpa
Potri.001G430200 1.0kb upstream 1.0kb upstream 5197 true Chr01: 46049832-46055028 Populus trichocarpa
Potri.001G430200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 46054029-46055028 Populus trichocarpa
Potri.001G430200 1.0kb downstream 1.0kb downstream 5197 true Chr01: 46048832-46054028 Populus trichocarpa
Potri.001G430200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 46048832-46049831 Populus trichocarpa
Potri.001G430200 2.0kb upstream 2.0kb upstream 6197 true Chr01: 46049832-46056028 Populus trichocarpa
Potri.001G430200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 46054029-46056028 Populus trichocarpa
Potri.001G430200 2.0kb downstream 2.0kb downstream 6197 true Chr01: 46047832-46054028 Populus trichocarpa
Potri.001G430200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 46047832-46049831 Populus trichocarpa
Potri.001G430200 5.0kb upstream 5.0kb upstream 9197 true Chr01: 46049832-46059028 Populus trichocarpa
Potri.001G430200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 46054029-46059028 Populus trichocarpa
Potri.001G430200 5.0kb downstream 5.0kb downstream 9197 true Chr01: 46044832-46054028 Populus trichocarpa
Potri.001G430200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 46044832-46049831 Populus trichocarpa
Potri.001G430200 10.0kb upstream 10.0kb upstream 14197 true Chr01: 46049832-46064028 Populus trichocarpa
Potri.001G430200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 46054029-46064028 Populus trichocarpa
Potri.001G430200 10.0kb downstream 10.0kb downstream 14197 true Chr01: 46039832-46054028 Populus trichocarpa
Potri.001G430200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 46039832-46049831 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450525 5262 Malpighiales View MSA
124237421 5268 Malvidae View MSA
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain