Gene : Potri.001G417000 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR13268:SF1 - AUTOPHAGY-RELATED PROTEIN 18F Genomic Order:  4306
Name:  ? Potri.001G417000 Secondary Identifier:  ? PAC:37275056
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G417000 0.5kb upstream 0.5kb upstream 8654 true Chr01: 44167471-44176124 Populus trichocarpa
Potri.001G417000 0.5kb upstream 0.5kb upstream 500 false Chr01: 44175625-44176124 Populus trichocarpa
Potri.001G417000 0.5kb downstream 0.5kb downstream 8654 true Chr01: 44166971-44175624 Populus trichocarpa
Potri.001G417000 0.5kb downstream 0.5kb downstream 500 false Chr01: 44166971-44167470 Populus trichocarpa
Potri.001G417000 1.0kb upstream 1.0kb upstream 9154 true Chr01: 44167471-44176624 Populus trichocarpa
Potri.001G417000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44175625-44176624 Populus trichocarpa
Potri.001G417000 1.0kb downstream 1.0kb downstream 9154 true Chr01: 44166471-44175624 Populus trichocarpa
Potri.001G417000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44166471-44167470 Populus trichocarpa
Potri.001G417000 2.0kb upstream 2.0kb upstream 10154 true Chr01: 44167471-44177624 Populus trichocarpa
Potri.001G417000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44175625-44177624 Populus trichocarpa
Potri.001G417000 2.0kb downstream 2.0kb downstream 10154 true Chr01: 44165471-44175624 Populus trichocarpa
Potri.001G417000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44165471-44167470 Populus trichocarpa
Potri.001G417000 5.0kb upstream 5.0kb upstream 13154 true Chr01: 44167471-44180624 Populus trichocarpa
Potri.001G417000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44175625-44180624 Populus trichocarpa
Potri.001G417000 5.0kb downstream 5.0kb downstream 13154 true Chr01: 44162471-44175624 Populus trichocarpa
Potri.001G417000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44162471-44167470 Populus trichocarpa
Potri.001G417000 10.0kb upstream 10.0kb upstream 18154 true Chr01: 44167471-44185624 Populus trichocarpa
Potri.001G417000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44175625-44185624 Populus trichocarpa
Potri.001G417000 10.0kb downstream 10.0kb downstream 18154 true Chr01: 44157471-44175624 Populus trichocarpa
Potri.001G417000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44157471-44167470 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452443 5262 Malpighiales View MSA
124241657 5268 Malvidae View MSA
124067149 5270 Rosid View MSA
123741778 5271 Pentapetalae View MSA
122794061 5272 Eudicot View MSA
122048367 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain