Gene : Potri.001G399000 P. trichocarpa v3.1
Defline:  (1 of 1) 3.1.3.77 - Acireductone synthase / E-1 enolase-phosphatase Genomic Order:  4113
Name:  ? Potri.001G399000 Secondary Identifier:  ? PAC:37273749
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-4361 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7270 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7528 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G399000 0.5kb upstream 0.5kb upstream 9016 true Chr01: 41999196-42008211 Populus trichocarpa
Potri.001G399000 0.5kb upstream 0.5kb upstream 500 false Chr01: 41999196-41999695 Populus trichocarpa
Potri.001G399000 0.5kb downstream 0.5kb downstream 9016 true Chr01: 41999696-42008711 Populus trichocarpa
Potri.001G399000 0.5kb downstream 0.5kb downstream 500 false Chr01: 42008212-42008711 Populus trichocarpa
Potri.001G399000 1.0kb upstream 1.0kb upstream 9516 true Chr01: 41998696-42008211 Populus trichocarpa
Potri.001G399000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 41998696-41999695 Populus trichocarpa
Potri.001G399000 1.0kb downstream 1.0kb downstream 9516 true Chr01: 41999696-42009211 Populus trichocarpa
Potri.001G399000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42008212-42009211 Populus trichocarpa
Potri.001G399000 2.0kb upstream 2.0kb upstream 10516 true Chr01: 41997696-42008211 Populus trichocarpa
Potri.001G399000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 41997696-41999695 Populus trichocarpa
Potri.001G399000 2.0kb downstream 2.0kb downstream 10516 true Chr01: 41999696-42010211 Populus trichocarpa
Potri.001G399000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42008212-42010211 Populus trichocarpa
Potri.001G399000 5.0kb upstream 5.0kb upstream 13516 true Chr01: 41994696-42008211 Populus trichocarpa
Potri.001G399000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 41994696-41999695 Populus trichocarpa
Potri.001G399000 5.0kb downstream 5.0kb downstream 13516 true Chr01: 41999696-42013211 Populus trichocarpa
Potri.001G399000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42008212-42013211 Populus trichocarpa
Potri.001G399000 10.0kb upstream 10.0kb upstream 18516 true Chr01: 41989696-42008211 Populus trichocarpa
Potri.001G399000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 41989696-41999695 Populus trichocarpa
Potri.001G399000 10.0kb downstream 10.0kb downstream 18516 true Chr01: 41999696-42018211 Populus trichocarpa
Potri.001G399000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42008212-42018211 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454241 5262 Malpighiales View MSA
124251861 5268 Malvidae View MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain