Gene : Potri.001G401800 P. trichocarpa v3.1
Defline:  (1 of 7) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  4145
Name:  ? Potri.001G401800 Secondary Identifier:  ? PAC:37278364
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G401800 0.5kb upstream 0.5kb upstream 1530 true Chr01: 42312327-42313856 Populus trichocarpa
Potri.001G401800 0.5kb upstream 0.5kb upstream 500 false Chr01: 42312327-42312826 Populus trichocarpa
Potri.001G401800 0.5kb downstream 0.5kb downstream 1530 true Chr01: 42312827-42314356 Populus trichocarpa
Potri.001G401800 0.5kb downstream 0.5kb downstream 500 false Chr01: 42313857-42314356 Populus trichocarpa
Potri.001G401800 1.0kb upstream 1.0kb upstream 2030 true Chr01: 42311827-42313856 Populus trichocarpa
Potri.001G401800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 42311827-42312826 Populus trichocarpa
Potri.001G401800 1.0kb downstream 1.0kb downstream 2030 true Chr01: 42312827-42314856 Populus trichocarpa
Potri.001G401800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 42313857-42314856 Populus trichocarpa
Potri.001G401800 2.0kb upstream 2.0kb upstream 3030 true Chr01: 42310827-42313856 Populus trichocarpa
Potri.001G401800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 42310827-42312826 Populus trichocarpa
Potri.001G401800 2.0kb downstream 2.0kb downstream 3030 true Chr01: 42312827-42315856 Populus trichocarpa
Potri.001G401800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 42313857-42315856 Populus trichocarpa
Potri.001G401800 5.0kb upstream 5.0kb upstream 6030 true Chr01: 42307827-42313856 Populus trichocarpa
Potri.001G401800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 42307827-42312826 Populus trichocarpa
Potri.001G401800 5.0kb downstream 5.0kb downstream 6030 true Chr01: 42312827-42318856 Populus trichocarpa
Potri.001G401800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 42313857-42318856 Populus trichocarpa
Potri.001G401800 10.0kb upstream 10.0kb upstream 11030 true Chr01: 42302827-42313856 Populus trichocarpa
Potri.001G401800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 42302827-42312826 Populus trichocarpa
Potri.001G401800 10.0kb downstream 10.0kb downstream 11030 true Chr01: 42312827-42323856 Populus trichocarpa
Potri.001G401800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 42313857-42323856 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122461698 5262 Malpighiales View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain