Gene : Potri.001G390900 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31165//PTHR31165:SF9 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Genomic Order:  4036
Name:  ? Potri.001G390900 Secondary Identifier:  ? PAC:37277978
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G390900 0.5kb upstream 0.5kb upstream 3027 true Chr01: 40895994-40899020 Populus trichocarpa
Potri.001G390900 0.5kb upstream 0.5kb upstream 500 false Chr01: 40898521-40899020 Populus trichocarpa
Potri.001G390900 0.5kb downstream 0.5kb downstream 3027 true Chr01: 40895494-40898520 Populus trichocarpa
Potri.001G390900 0.5kb downstream 0.5kb downstream 500 false Chr01: 40895494-40895993 Populus trichocarpa
Potri.001G390900 1.0kb upstream 1.0kb upstream 3527 true Chr01: 40895994-40899520 Populus trichocarpa
Potri.001G390900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 40898521-40899520 Populus trichocarpa
Potri.001G390900 1.0kb downstream 1.0kb downstream 3527 true Chr01: 40894994-40898520 Populus trichocarpa
Potri.001G390900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 40894994-40895993 Populus trichocarpa
Potri.001G390900 2.0kb upstream 2.0kb upstream 4527 true Chr01: 40895994-40900520 Populus trichocarpa
Potri.001G390900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 40898521-40900520 Populus trichocarpa
Potri.001G390900 2.0kb downstream 2.0kb downstream 4527 true Chr01: 40893994-40898520 Populus trichocarpa
Potri.001G390900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 40893994-40895993 Populus trichocarpa
Potri.001G390900 5.0kb upstream 5.0kb upstream 7527 true Chr01: 40895994-40903520 Populus trichocarpa
Potri.001G390900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 40898521-40903520 Populus trichocarpa
Potri.001G390900 5.0kb downstream 5.0kb downstream 7527 true Chr01: 40890994-40898520 Populus trichocarpa
Potri.001G390900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 40890994-40895993 Populus trichocarpa
Potri.001G390900 10.0kb upstream 10.0kb upstream 12527 true Chr01: 40895994-40908520 Populus trichocarpa
Potri.001G390900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 40898521-40908520 Populus trichocarpa
Potri.001G390900 10.0kb downstream 10.0kb downstream 12527 true Chr01: 40885994-40898520 Populus trichocarpa
Potri.001G390900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 40885994-40895993 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122463502 5262 Malpighiales View MSA
124244841 5268 Malvidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain