Gene : Potri.002G022200 P. trichocarpa v3.1
Defline:  similar to cytomatrix protein-related; weakly similar to CAST1 (Rattus norvegicus) gi|22138113|gb|AAL07517|; [ co-ortholog (2of2) of At1g19980, ] Genomic Order:  227
Name:  ? Potri.002G022200 Secondary Identifier:  ? PAC:37257073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G022200 0.5kb upstream 0.5kb upstream 3287 true Chr02: 1342669-1345955 Populus trichocarpa
Potri.002G022200 0.5kb upstream 0.5kb upstream 500 false Chr02: 1345456-1345955 Populus trichocarpa
Potri.002G022200 0.5kb downstream 0.5kb downstream 3287 true Chr02: 1342169-1345455 Populus trichocarpa
Potri.002G022200 0.5kb downstream 0.5kb downstream 500 false Chr02: 1342169-1342668 Populus trichocarpa
Potri.002G022200 1.0kb upstream 1.0kb upstream 3787 true Chr02: 1342669-1346455 Populus trichocarpa
Potri.002G022200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1345456-1346455 Populus trichocarpa
Potri.002G022200 1.0kb downstream 1.0kb downstream 3787 true Chr02: 1341669-1345455 Populus trichocarpa
Potri.002G022200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1341669-1342668 Populus trichocarpa
Potri.002G022200 2.0kb upstream 2.0kb upstream 4787 true Chr02: 1342669-1347455 Populus trichocarpa
Potri.002G022200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1345456-1347455 Populus trichocarpa
Potri.002G022200 2.0kb downstream 2.0kb downstream 4787 true Chr02: 1340669-1345455 Populus trichocarpa
Potri.002G022200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1340669-1342668 Populus trichocarpa
Potri.002G022200 5.0kb upstream 5.0kb upstream 7787 true Chr02: 1342669-1350455 Populus trichocarpa
Potri.002G022200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1345456-1350455 Populus trichocarpa
Potri.002G022200 5.0kb downstream 5.0kb downstream 7787 true Chr02: 1337669-1345455 Populus trichocarpa
Potri.002G022200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1337669-1342668 Populus trichocarpa
Potri.002G022200 10.0kb upstream 10.0kb upstream 12787 true Chr02: 1342669-1355455 Populus trichocarpa
Potri.002G022200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1345456-1355455 Populus trichocarpa
Potri.002G022200 10.0kb downstream 10.0kb downstream 12787 true Chr02: 1332669-1345455 Populus trichocarpa
Potri.002G022200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1332669-1342668 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410892 5262 Malpighiales View MSA
124251824 5268 Malvidae View MSA
124061028 5270 Rosid View MSA
123740705 5271 Pentapetalae View MSA
122794859 5272 Eudicot View MSA
122047772 5273 Angiosperm View MSA
121310791 5274 Embryophyte View MSA
123348191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain