Gene : Potri.002G002200 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR31065//PTHR31065:SF12 - FAMILY NOT NAMED // PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  22
Name:  ? Potri.002G002200 Secondary Identifier:  ? PAC:37256710

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G002200 0.5kb upstream 0.5kb upstream 3353 true Chr02: 147352-150704 Populus trichocarpa
Potri.002G002200 0.5kb upstream 0.5kb upstream 500 false Chr02: 150205-150704 Populus trichocarpa
Potri.002G002200 0.5kb downstream 0.5kb downstream 3353 true Chr02: 146852-150204 Populus trichocarpa
Potri.002G002200 0.5kb downstream 0.5kb downstream 500 false Chr02: 146852-147351 Populus trichocarpa
Potri.002G002200 1.0kb upstream 1.0kb upstream 3853 true Chr02: 147352-151204 Populus trichocarpa
Potri.002G002200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 150205-151204 Populus trichocarpa
Potri.002G002200 1.0kb downstream 1.0kb downstream 3853 true Chr02: 146352-150204 Populus trichocarpa
Potri.002G002200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 146352-147351 Populus trichocarpa
Potri.002G002200 2.0kb upstream 2.0kb upstream 4853 true Chr02: 147352-152204 Populus trichocarpa
Potri.002G002200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 150205-152204 Populus trichocarpa
Potri.002G002200 2.0kb downstream 2.0kb downstream 4853 true Chr02: 145352-150204 Populus trichocarpa
Potri.002G002200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 145352-147351 Populus trichocarpa
Potri.002G002200 5.0kb upstream 5.0kb upstream 7853 true Chr02: 147352-155204 Populus trichocarpa
Potri.002G002200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 150205-155204 Populus trichocarpa
Potri.002G002200 5.0kb downstream 5.0kb downstream 7853 true Chr02: 142352-150204 Populus trichocarpa
Potri.002G002200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 142352-147351 Populus trichocarpa
Potri.002G002200 10.0kb upstream 10.0kb upstream 12853 true Chr02: 147352-160204 Populus trichocarpa
Potri.002G002200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 150205-160204 Populus trichocarpa
Potri.002G002200 10.0kb downstream 10.0kb downstream 12853 true Chr02: 137352-150204 Populus trichocarpa
Potri.002G002200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 137352-147351 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122433175 5262 Malpighiales View MSA
124250632 5268 Malvidae View MSA
124067246 5270 Rosid View MSA
123753118 5271 Pentapetalae View MSA
122788772 5272 Eudicot View MSA
122050012 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain