Gene : Potri.002G006600 P. trichocarpa v3.1
Defline:  (1 of 3) K12666 - oligosaccharyltransferase complex subunit alpha (ribophorin I) (OST1, RPN1) Genomic Order:  67
Name:  ? Potri.002G006600 Secondary Identifier:  ? PAC:37257987
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G006600 0.5kb upstream 0.5kb upstream 4738 true Chr02: 360030-364767 Populus trichocarpa
Potri.002G006600 0.5kb upstream 0.5kb upstream 500 false Chr02: 360030-360529 Populus trichocarpa
Potri.002G006600 0.5kb downstream 0.5kb downstream 4738 true Chr02: 360530-365267 Populus trichocarpa
Potri.002G006600 0.5kb downstream 0.5kb downstream 500 false Chr02: 364768-365267 Populus trichocarpa
Potri.002G006600 1.0kb upstream 1.0kb upstream 5238 true Chr02: 359530-364767 Populus trichocarpa
Potri.002G006600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 359530-360529 Populus trichocarpa
Potri.002G006600 1.0kb downstream 1.0kb downstream 5238 true Chr02: 360530-365767 Populus trichocarpa
Potri.002G006600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 364768-365767 Populus trichocarpa
Potri.002G006600 2.0kb upstream 2.0kb upstream 6238 true Chr02: 358530-364767 Populus trichocarpa
Potri.002G006600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 358530-360529 Populus trichocarpa
Potri.002G006600 2.0kb downstream 2.0kb downstream 6238 true Chr02: 360530-366767 Populus trichocarpa
Potri.002G006600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 364768-366767 Populus trichocarpa
Potri.002G006600 5.0kb upstream 5.0kb upstream 9238 true Chr02: 355530-364767 Populus trichocarpa
Potri.002G006600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 355530-360529 Populus trichocarpa
Potri.002G006600 5.0kb downstream 5.0kb downstream 9238 true Chr02: 360530-369767 Populus trichocarpa
Potri.002G006600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 364768-369767 Populus trichocarpa
Potri.002G006600 10.0kb upstream 10.0kb upstream 14238 true Chr02: 350530-364767 Populus trichocarpa
Potri.002G006600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 350530-360529 Populus trichocarpa
Potri.002G006600 10.0kb downstream 10.0kb downstream 14238 true Chr02: 360530-374767 Populus trichocarpa
Potri.002G006600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 364768-374767 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455123 5262 Malpighiales View MSA
124237474 5268 Malvidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain