Gene : Potri.002G091700 P. trichocarpa v3.1
Defline:  (1 of 19) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  956
Name:  ? Potri.002G091700 Secondary Identifier:  ? PAC:37257158
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G091700 0.5kb upstream 0.5kb upstream 11403 true Chr02: 6529421-6540823 Populus trichocarpa
Potri.002G091700 0.5kb upstream 0.5kb upstream 500 false Chr02: 6529421-6529920 Populus trichocarpa
Potri.002G091700 0.5kb downstream 0.5kb downstream 11403 true Chr02: 6529921-6541323 Populus trichocarpa
Potri.002G091700 0.5kb downstream 0.5kb downstream 500 false Chr02: 6540824-6541323 Populus trichocarpa
Potri.002G091700 1.0kb upstream 1.0kb upstream 11903 true Chr02: 6528921-6540823 Populus trichocarpa
Potri.002G091700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6528921-6529920 Populus trichocarpa
Potri.002G091700 1.0kb downstream 1.0kb downstream 11903 true Chr02: 6529921-6541823 Populus trichocarpa
Potri.002G091700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6540824-6541823 Populus trichocarpa
Potri.002G091700 2.0kb upstream 2.0kb upstream 12903 true Chr02: 6527921-6540823 Populus trichocarpa
Potri.002G091700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6527921-6529920 Populus trichocarpa
Potri.002G091700 2.0kb downstream 2.0kb downstream 12903 true Chr02: 6529921-6542823 Populus trichocarpa
Potri.002G091700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6540824-6542823 Populus trichocarpa
Potri.002G091700 5.0kb upstream 5.0kb upstream 15903 true Chr02: 6524921-6540823 Populus trichocarpa
Potri.002G091700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6524921-6529920 Populus trichocarpa
Potri.002G091700 5.0kb downstream 5.0kb downstream 15903 true Chr02: 6529921-6545823 Populus trichocarpa
Potri.002G091700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6540824-6545823 Populus trichocarpa
Potri.002G091700 10.0kb upstream 10.0kb upstream 20903 true Chr02: 6519921-6540823 Populus trichocarpa
Potri.002G091700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6519921-6529920 Populus trichocarpa
Potri.002G091700 10.0kb downstream 10.0kb downstream 20903 true Chr02: 6529921-6550823 Populus trichocarpa
Potri.002G091700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6540824-6550823 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122384490 5262 Malpighiales View MSA
124237779 5268 Malvidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain