Gene : Potri.002G083200 P. trichocarpa v3.1
Defline:  (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  867
Name:  ? Potri.002G083200 Secondary Identifier:  ? PAC:37256138
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5068 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G083200 0.5kb upstream 0.5kb upstream 4511 true Chr02: 5823372-5827882 Populus trichocarpa
Potri.002G083200 0.5kb upstream 0.5kb upstream 500 false Chr02: 5827383-5827882 Populus trichocarpa
Potri.002G083200 0.5kb downstream 0.5kb downstream 4511 true Chr02: 5822872-5827382 Populus trichocarpa
Potri.002G083200 0.5kb downstream 0.5kb downstream 500 false Chr02: 5822872-5823371 Populus trichocarpa
Potri.002G083200 1.0kb upstream 1.0kb upstream 5011 true Chr02: 5823372-5828382 Populus trichocarpa
Potri.002G083200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5827383-5828382 Populus trichocarpa
Potri.002G083200 1.0kb downstream 1.0kb downstream 5011 true Chr02: 5822372-5827382 Populus trichocarpa
Potri.002G083200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5822372-5823371 Populus trichocarpa
Potri.002G083200 2.0kb upstream 2.0kb upstream 6011 true Chr02: 5823372-5829382 Populus trichocarpa
Potri.002G083200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5827383-5829382 Populus trichocarpa
Potri.002G083200 2.0kb downstream 2.0kb downstream 6011 true Chr02: 5821372-5827382 Populus trichocarpa
Potri.002G083200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5821372-5823371 Populus trichocarpa
Potri.002G083200 5.0kb upstream 5.0kb upstream 9011 true Chr02: 5823372-5832382 Populus trichocarpa
Potri.002G083200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5827383-5832382 Populus trichocarpa
Potri.002G083200 5.0kb downstream 5.0kb downstream 9011 true Chr02: 5818372-5827382 Populus trichocarpa
Potri.002G083200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5818372-5823371 Populus trichocarpa
Potri.002G083200 10.0kb upstream 10.0kb upstream 14011 true Chr02: 5823372-5837382 Populus trichocarpa
Potri.002G083200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5827383-5837382 Populus trichocarpa
Potri.002G083200 10.0kb downstream 10.0kb downstream 14011 true Chr02: 5813372-5827382 Populus trichocarpa
Potri.002G083200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5813372-5823371 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450511 5262 Malpighiales View MSA
124242720 5268 Malvidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain