Gene : Potri.002G075200 P. trichocarpa v3.1

Defline:  (1 of 222) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  786
Name:  ? Potri.002G075200 Secondary Identifier:  ? PAC:37257917

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G075200 0.5kb upstream 0.5kb upstream 2546 true Chr02: 5196367-5198912 Populus trichocarpa
Potri.002G075200 0.5kb upstream 0.5kb upstream 500 false Chr02: 5198413-5198912 Populus trichocarpa
Potri.002G075200 0.5kb downstream 0.5kb downstream 2546 true Chr02: 5195867-5198412 Populus trichocarpa
Potri.002G075200 0.5kb downstream 0.5kb downstream 500 false Chr02: 5195867-5196366 Populus trichocarpa
Potri.002G075200 1.0kb upstream 1.0kb upstream 3046 true Chr02: 5196367-5199412 Populus trichocarpa
Potri.002G075200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5198413-5199412 Populus trichocarpa
Potri.002G075200 1.0kb downstream 1.0kb downstream 3046 true Chr02: 5195367-5198412 Populus trichocarpa
Potri.002G075200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5195367-5196366 Populus trichocarpa
Potri.002G075200 2.0kb upstream 2.0kb upstream 4046 true Chr02: 5196367-5200412 Populus trichocarpa
Potri.002G075200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5198413-5200412 Populus trichocarpa
Potri.002G075200 2.0kb downstream 2.0kb downstream 4046 true Chr02: 5194367-5198412 Populus trichocarpa
Potri.002G075200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5194367-5196366 Populus trichocarpa
Potri.002G075200 5.0kb upstream 5.0kb upstream 7046 true Chr02: 5196367-5203412 Populus trichocarpa
Potri.002G075200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5198413-5203412 Populus trichocarpa
Potri.002G075200 5.0kb downstream 5.0kb downstream 7046 true Chr02: 5191367-5198412 Populus trichocarpa
Potri.002G075200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5191367-5196366 Populus trichocarpa
Potri.002G075200 10.0kb upstream 10.0kb upstream 12046 true Chr02: 5196367-5208412 Populus trichocarpa
Potri.002G075200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5198413-5208412 Populus trichocarpa
Potri.002G075200 10.0kb downstream 10.0kb downstream 12046 true Chr02: 5186367-5198412 Populus trichocarpa
Potri.002G075200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5186367-5196366 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454264 5262 Malpighiales View MSA
124237982 5268 Malvidae View MSA
124061594 5270 Rosid View MSA
123740286 5271 Pentapetalae View MSA
122790311 5272 Eudicot View MSA
122046629 5273 Angiosperm View MSA
121310635 5274 Embryophyte View MSA
123348067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain