Gene : Potri.002G162900 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  1710
Name:  ? Potri.002G162900 Secondary Identifier:  ? PAC:37256817
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7039 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G162900 0.5kb upstream 0.5kb upstream 3822 true Chr02: 12299605-12303426 Populus trichocarpa
Potri.002G162900 0.5kb upstream 0.5kb upstream 500 false Chr02: 12302927-12303426 Populus trichocarpa
Potri.002G162900 0.5kb downstream 0.5kb downstream 3822 true Chr02: 12299105-12302926 Populus trichocarpa
Potri.002G162900 0.5kb downstream 0.5kb downstream 500 false Chr02: 12299105-12299604 Populus trichocarpa
Potri.002G162900 1.0kb upstream 1.0kb upstream 4322 true Chr02: 12299605-12303926 Populus trichocarpa
Potri.002G162900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12302927-12303926 Populus trichocarpa
Potri.002G162900 1.0kb downstream 1.0kb downstream 4322 true Chr02: 12298605-12302926 Populus trichocarpa
Potri.002G162900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12298605-12299604 Populus trichocarpa
Potri.002G162900 2.0kb upstream 2.0kb upstream 5322 true Chr02: 12299605-12304926 Populus trichocarpa
Potri.002G162900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12302927-12304926 Populus trichocarpa
Potri.002G162900 2.0kb downstream 2.0kb downstream 5322 true Chr02: 12297605-12302926 Populus trichocarpa
Potri.002G162900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12297605-12299604 Populus trichocarpa
Potri.002G162900 5.0kb upstream 5.0kb upstream 8322 true Chr02: 12299605-12307926 Populus trichocarpa
Potri.002G162900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12302927-12307926 Populus trichocarpa
Potri.002G162900 5.0kb downstream 5.0kb downstream 8322 true Chr02: 12294605-12302926 Populus trichocarpa
Potri.002G162900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12294605-12299604 Populus trichocarpa
Potri.002G162900 10.0kb upstream 10.0kb upstream 13322 true Chr02: 12299605-12312926 Populus trichocarpa
Potri.002G162900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12302927-12312926 Populus trichocarpa
Potri.002G162900 10.0kb downstream 10.0kb downstream 13322 true Chr02: 12289605-12302926 Populus trichocarpa
Potri.002G162900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12289605-12299604 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452515 5262 Malpighiales View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain