Gene : Potri.002G146800 P. trichocarpa v3.1

Defline:  (1 of 4) K02953 - small subunit ribosomal protein S13e (RP-S13e, RPS13) Genomic Order:  1539
Name:  ? Potri.002G146800 Secondary Identifier:  ? PAC:37257285

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G146800 0.5kb upstream 0.5kb upstream 2703 true Chr02: 10919694-10922396 Populus trichocarpa
Potri.002G146800 0.5kb upstream 0.5kb upstream 500 false Chr02: 10919694-10920193 Populus trichocarpa
Potri.002G146800 0.5kb downstream 0.5kb downstream 2703 true Chr02: 10920194-10922896 Populus trichocarpa
Potri.002G146800 0.5kb downstream 0.5kb downstream 500 false Chr02: 10922397-10922896 Populus trichocarpa
Potri.002G146800 1.0kb upstream 1.0kb upstream 3203 true Chr02: 10919194-10922396 Populus trichocarpa
Potri.002G146800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10919194-10920193 Populus trichocarpa
Potri.002G146800 1.0kb downstream 1.0kb downstream 3203 true Chr02: 10920194-10923396 Populus trichocarpa
Potri.002G146800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10922397-10923396 Populus trichocarpa
Potri.002G146800 2.0kb upstream 2.0kb upstream 4203 true Chr02: 10918194-10922396 Populus trichocarpa
Potri.002G146800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10918194-10920193 Populus trichocarpa
Potri.002G146800 2.0kb downstream 2.0kb downstream 4203 true Chr02: 10920194-10924396 Populus trichocarpa
Potri.002G146800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10922397-10924396 Populus trichocarpa
Potri.002G146800 5.0kb upstream 5.0kb upstream 7203 true Chr02: 10915194-10922396 Populus trichocarpa
Potri.002G146800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10915194-10920193 Populus trichocarpa
Potri.002G146800 5.0kb downstream 5.0kb downstream 7203 true Chr02: 10920194-10927396 Populus trichocarpa
Potri.002G146800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10922397-10927396 Populus trichocarpa
Potri.002G146800 10.0kb upstream 10.0kb upstream 12203 true Chr02: 10910194-10922396 Populus trichocarpa
Potri.002G146800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10910194-10920193 Populus trichocarpa
Potri.002G146800 10.0kb downstream 10.0kb downstream 12203 true Chr02: 10920194-10932396 Populus trichocarpa
Potri.002G146800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10922397-10932396 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122412310 5262 Malpighiales View MSA
124251739 5268 Malvidae View MSA
124068478 5270 Rosid View MSA
123750246 5271 Pentapetalae View MSA
122796127 5272 Eudicot View MSA
122043719 5273 Angiosperm View MSA
121347560 5274 Embryophyte View MSA
123424528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain