Gene : Potri.002G141400 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1481
Name:  ? Potri.002G141400 Secondary Identifier:  ? PAC:37256158
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G141400 0.5kb upstream 0.5kb upstream 2435 true Chr02: 10506695-10509129 Populus trichocarpa
Potri.002G141400 0.5kb upstream 0.5kb upstream 500 false Chr02: 10508630-10509129 Populus trichocarpa
Potri.002G141400 0.5kb downstream 0.5kb downstream 2435 true Chr02: 10506195-10508629 Populus trichocarpa
Potri.002G141400 0.5kb downstream 0.5kb downstream 500 false Chr02: 10506195-10506694 Populus trichocarpa
Potri.002G141400 1.0kb upstream 1.0kb upstream 2935 true Chr02: 10506695-10509629 Populus trichocarpa
Potri.002G141400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10508630-10509629 Populus trichocarpa
Potri.002G141400 1.0kb downstream 1.0kb downstream 2935 true Chr02: 10505695-10508629 Populus trichocarpa
Potri.002G141400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10505695-10506694 Populus trichocarpa
Potri.002G141400 2.0kb upstream 2.0kb upstream 3935 true Chr02: 10506695-10510629 Populus trichocarpa
Potri.002G141400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10508630-10510629 Populus trichocarpa
Potri.002G141400 2.0kb downstream 2.0kb downstream 3935 true Chr02: 10504695-10508629 Populus trichocarpa
Potri.002G141400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10504695-10506694 Populus trichocarpa
Potri.002G141400 5.0kb upstream 5.0kb upstream 6935 true Chr02: 10506695-10513629 Populus trichocarpa
Potri.002G141400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10508630-10513629 Populus trichocarpa
Potri.002G141400 5.0kb downstream 5.0kb downstream 6935 true Chr02: 10501695-10508629 Populus trichocarpa
Potri.002G141400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10501695-10506694 Populus trichocarpa
Potri.002G141400 10.0kb upstream 10.0kb upstream 11935 true Chr02: 10506695-10518629 Populus trichocarpa
Potri.002G141400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10508630-10518629 Populus trichocarpa
Potri.002G141400 10.0kb downstream 10.0kb downstream 11935 true Chr02: 10496695-10508629 Populus trichocarpa
Potri.002G141400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10496695-10506694 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411903 5262 Malpighiales View MSA
124206332 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain