Gene : Potri.002G133500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR13286:SF6 - HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30L Genomic Order:  1399
Name:  ? Potri.002G133500 Secondary Identifier:  ? PAC:37257333
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G133500 0.5kb upstream 0.5kb upstream 4281 true Chr02: 9955871-9960151 Populus trichocarpa
Potri.002G133500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9959652-9960151 Populus trichocarpa
Potri.002G133500 0.5kb downstream 0.5kb downstream 4281 true Chr02: 9955371-9959651 Populus trichocarpa
Potri.002G133500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9955371-9955870 Populus trichocarpa
Potri.002G133500 1.0kb upstream 1.0kb upstream 4781 true Chr02: 9955871-9960651 Populus trichocarpa
Potri.002G133500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9959652-9960651 Populus trichocarpa
Potri.002G133500 1.0kb downstream 1.0kb downstream 4781 true Chr02: 9954871-9959651 Populus trichocarpa
Potri.002G133500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9954871-9955870 Populus trichocarpa
Potri.002G133500 2.0kb upstream 2.0kb upstream 5781 true Chr02: 9955871-9961651 Populus trichocarpa
Potri.002G133500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9959652-9961651 Populus trichocarpa
Potri.002G133500 2.0kb downstream 2.0kb downstream 5781 true Chr02: 9953871-9959651 Populus trichocarpa
Potri.002G133500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9953871-9955870 Populus trichocarpa
Potri.002G133500 5.0kb upstream 5.0kb upstream 8781 true Chr02: 9955871-9964651 Populus trichocarpa
Potri.002G133500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9959652-9964651 Populus trichocarpa
Potri.002G133500 5.0kb downstream 5.0kb downstream 8781 true Chr02: 9950871-9959651 Populus trichocarpa
Potri.002G133500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9950871-9955870 Populus trichocarpa
Potri.002G133500 10.0kb upstream 10.0kb upstream 13781 true Chr02: 9955871-9969651 Populus trichocarpa
Potri.002G133500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9959652-9969651 Populus trichocarpa
Potri.002G133500 10.0kb downstream 10.0kb downstream 13781 true Chr02: 9945871-9959651 Populus trichocarpa
Potri.002G133500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9945871-9955870 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122398918 5262 Malpighiales View MSA
124253540 5268 Malvidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain