Gene : Potri.002G118366 P. trichocarpa v3.1

Defline:  (1 of 2) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  1237
Name:  ? Potri.002G118366 Secondary Identifier:  ? PAC:37255996

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G118366 0.5kb upstream 0.5kb upstream 2604 true Chr02: 8859941-8862544 Populus trichocarpa
Potri.002G118366 0.5kb upstream 0.5kb upstream 500 false Chr02: 8859941-8860440 Populus trichocarpa
Potri.002G118366 0.5kb downstream 0.5kb downstream 2604 true Chr02: 8860441-8863044 Populus trichocarpa
Potri.002G118366 0.5kb downstream 0.5kb downstream 500 false Chr02: 8862545-8863044 Populus trichocarpa
Potri.002G118366 1.0kb upstream 1.0kb upstream 3104 true Chr02: 8859441-8862544 Populus trichocarpa
Potri.002G118366 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8859441-8860440 Populus trichocarpa
Potri.002G118366 1.0kb downstream 1.0kb downstream 3104 true Chr02: 8860441-8863544 Populus trichocarpa
Potri.002G118366 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8862545-8863544 Populus trichocarpa
Potri.002G118366 2.0kb upstream 2.0kb upstream 4104 true Chr02: 8858441-8862544 Populus trichocarpa
Potri.002G118366 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8858441-8860440 Populus trichocarpa
Potri.002G118366 2.0kb downstream 2.0kb downstream 4104 true Chr02: 8860441-8864544 Populus trichocarpa
Potri.002G118366 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8862545-8864544 Populus trichocarpa
Potri.002G118366 5.0kb upstream 5.0kb upstream 7104 true Chr02: 8855441-8862544 Populus trichocarpa
Potri.002G118366 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8855441-8860440 Populus trichocarpa
Potri.002G118366 5.0kb downstream 5.0kb downstream 7104 true Chr02: 8860441-8867544 Populus trichocarpa
Potri.002G118366 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8862545-8867544 Populus trichocarpa
Potri.002G118366 10.0kb upstream 10.0kb upstream 12104 true Chr02: 8850441-8862544 Populus trichocarpa
Potri.002G118366 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8850441-8860440 Populus trichocarpa
Potri.002G118366 10.0kb downstream 10.0kb downstream 12104 true Chr02: 8860441-8872544 Populus trichocarpa
Potri.002G118366 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8862545-8872544 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458386 5262 Malpighiales View MSA
124240807 5268 Malvidae View MSA
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain