Gene : Potri.002G122700 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10996//PTHR10996:SF170 - 2-HYDROXYACID DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1284
Name:  ? Potri.002G122700 Secondary Identifier:  ? PAC:37259881
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa SER-GLYSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa SERSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G122700 0.5kb upstream 0.5kb upstream 3695 true Chr02: 9176312-9180006 Populus trichocarpa
Potri.002G122700 0.5kb upstream 0.5kb upstream 500 false Chr02: 9176312-9176811 Populus trichocarpa
Potri.002G122700 0.5kb downstream 0.5kb downstream 3695 true Chr02: 9176812-9180506 Populus trichocarpa
Potri.002G122700 0.5kb downstream 0.5kb downstream 500 false Chr02: 9180007-9180506 Populus trichocarpa
Potri.002G122700 1.0kb upstream 1.0kb upstream 4195 true Chr02: 9175812-9180006 Populus trichocarpa
Potri.002G122700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9175812-9176811 Populus trichocarpa
Potri.002G122700 1.0kb downstream 1.0kb downstream 4195 true Chr02: 9176812-9181006 Populus trichocarpa
Potri.002G122700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9180007-9181006 Populus trichocarpa
Potri.002G122700 2.0kb upstream 2.0kb upstream 5195 true Chr02: 9174812-9180006 Populus trichocarpa
Potri.002G122700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9174812-9176811 Populus trichocarpa
Potri.002G122700 2.0kb downstream 2.0kb downstream 5195 true Chr02: 9176812-9182006 Populus trichocarpa
Potri.002G122700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9180007-9182006 Populus trichocarpa
Potri.002G122700 5.0kb upstream 5.0kb upstream 8195 true Chr02: 9171812-9180006 Populus trichocarpa
Potri.002G122700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9171812-9176811 Populus trichocarpa
Potri.002G122700 5.0kb downstream 5.0kb downstream 8195 true Chr02: 9176812-9185006 Populus trichocarpa
Potri.002G122700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9180007-9185006 Populus trichocarpa
Potri.002G122700 10.0kb upstream 10.0kb upstream 13195 true Chr02: 9166812-9180006 Populus trichocarpa
Potri.002G122700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9166812-9176811 Populus trichocarpa
Potri.002G122700 10.0kb downstream 10.0kb downstream 13195 true Chr02: 9176812-9190006 Populus trichocarpa
Potri.002G122700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9180007-9190006 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425869 5262 Malpighiales View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain