Gene : Potri.002G109200 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  1142
Name:  ? Potri.002G109200 Secondary Identifier:  ? PAC:37258815
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-2161 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3841 Populus trichocarpa pathologic  
Ptrichocarpa SER-GLYSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G109200 0.5kb upstream 0.5kb upstream 6253 true Chr02: 8033149-8039401 Populus trichocarpa
Potri.002G109200 0.5kb upstream 0.5kb upstream 500 false Chr02: 8038902-8039401 Populus trichocarpa
Potri.002G109200 0.5kb downstream 0.5kb downstream 6253 true Chr02: 8032649-8038901 Populus trichocarpa
Potri.002G109200 0.5kb downstream 0.5kb downstream 500 false Chr02: 8032649-8033148 Populus trichocarpa
Potri.002G109200 1.0kb upstream 1.0kb upstream 6753 true Chr02: 8033149-8039901 Populus trichocarpa
Potri.002G109200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 8038902-8039901 Populus trichocarpa
Potri.002G109200 1.0kb downstream 1.0kb downstream 6753 true Chr02: 8032149-8038901 Populus trichocarpa
Potri.002G109200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 8032149-8033148 Populus trichocarpa
Potri.002G109200 2.0kb upstream 2.0kb upstream 7753 true Chr02: 8033149-8040901 Populus trichocarpa
Potri.002G109200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 8038902-8040901 Populus trichocarpa
Potri.002G109200 2.0kb downstream 2.0kb downstream 7753 true Chr02: 8031149-8038901 Populus trichocarpa
Potri.002G109200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 8031149-8033148 Populus trichocarpa
Potri.002G109200 5.0kb upstream 5.0kb upstream 10753 true Chr02: 8033149-8043901 Populus trichocarpa
Potri.002G109200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 8038902-8043901 Populus trichocarpa
Potri.002G109200 5.0kb downstream 5.0kb downstream 10753 true Chr02: 8028149-8038901 Populus trichocarpa
Potri.002G109200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 8028149-8033148 Populus trichocarpa
Potri.002G109200 10.0kb upstream 10.0kb upstream 15753 true Chr02: 8033149-8048901 Populus trichocarpa
Potri.002G109200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 8038902-8048901 Populus trichocarpa
Potri.002G109200 10.0kb downstream 10.0kb downstream 15753 true Chr02: 8023149-8038901 Populus trichocarpa
Potri.002G109200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 8023149-8033148 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449832 5262 Malpighiales View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain