Gene : Potri.002G212400 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  2211
Name:  ? Potri.002G212400 Secondary Identifier:  ? PAC:37257170
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G212400 0.5kb upstream 0.5kb upstream 4190 true Chr02: 19000952-19005141 Populus trichocarpa
Potri.002G212400 0.5kb upstream 0.5kb upstream 500 false Chr02: 19000952-19001451 Populus trichocarpa
Potri.002G212400 0.5kb downstream 0.5kb downstream 4190 true Chr02: 19001452-19005641 Populus trichocarpa
Potri.002G212400 0.5kb downstream 0.5kb downstream 500 false Chr02: 19005142-19005641 Populus trichocarpa
Potri.002G212400 1.0kb upstream 1.0kb upstream 4690 true Chr02: 19000452-19005141 Populus trichocarpa
Potri.002G212400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 19000452-19001451 Populus trichocarpa
Potri.002G212400 1.0kb downstream 1.0kb downstream 4690 true Chr02: 19001452-19006141 Populus trichocarpa
Potri.002G212400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 19005142-19006141 Populus trichocarpa
Potri.002G212400 2.0kb upstream 2.0kb upstream 5690 true Chr02: 18999452-19005141 Populus trichocarpa
Potri.002G212400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18999452-19001451 Populus trichocarpa
Potri.002G212400 2.0kb downstream 2.0kb downstream 5690 true Chr02: 19001452-19007141 Populus trichocarpa
Potri.002G212400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 19005142-19007141 Populus trichocarpa
Potri.002G212400 5.0kb upstream 5.0kb upstream 8690 true Chr02: 18996452-19005141 Populus trichocarpa
Potri.002G212400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18996452-19001451 Populus trichocarpa
Potri.002G212400 5.0kb downstream 5.0kb downstream 8690 true Chr02: 19001452-19010141 Populus trichocarpa
Potri.002G212400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 19005142-19010141 Populus trichocarpa
Potri.002G212400 10.0kb upstream 10.0kb upstream 13690 true Chr02: 18991452-19005141 Populus trichocarpa
Potri.002G212400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18991452-19001451 Populus trichocarpa
Potri.002G212400 10.0kb downstream 10.0kb downstream 13690 true Chr02: 19001452-19015141 Populus trichocarpa
Potri.002G212400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 19005142-19015141 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454877 5262 Malpighiales View MSA
124239302 5268 Malvidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain