Gene : Potri.002G196100 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR33921:SF2 - CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED Genomic Order:  2048
Name:  ? Potri.002G196100 Secondary Identifier:  ? PAC:37258321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G196100 0.5kb upstream 0.5kb upstream 2499 true Chr02: 15705899-15708397 Populus trichocarpa
Potri.002G196100 0.5kb upstream 0.5kb upstream 500 false Chr02: 15705899-15706398 Populus trichocarpa
Potri.002G196100 0.5kb downstream 0.5kb downstream 2499 true Chr02: 15706399-15708897 Populus trichocarpa
Potri.002G196100 0.5kb downstream 0.5kb downstream 500 false Chr02: 15708398-15708897 Populus trichocarpa
Potri.002G196100 1.0kb upstream 1.0kb upstream 2999 true Chr02: 15705399-15708397 Populus trichocarpa
Potri.002G196100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15705399-15706398 Populus trichocarpa
Potri.002G196100 1.0kb downstream 1.0kb downstream 2999 true Chr02: 15706399-15709397 Populus trichocarpa
Potri.002G196100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15708398-15709397 Populus trichocarpa
Potri.002G196100 2.0kb upstream 2.0kb upstream 3999 true Chr02: 15704399-15708397 Populus trichocarpa
Potri.002G196100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15704399-15706398 Populus trichocarpa
Potri.002G196100 2.0kb downstream 2.0kb downstream 3999 true Chr02: 15706399-15710397 Populus trichocarpa
Potri.002G196100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15708398-15710397 Populus trichocarpa
Potri.002G196100 5.0kb upstream 5.0kb upstream 6999 true Chr02: 15701399-15708397 Populus trichocarpa
Potri.002G196100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15701399-15706398 Populus trichocarpa
Potri.002G196100 5.0kb downstream 5.0kb downstream 6999 true Chr02: 15706399-15713397 Populus trichocarpa
Potri.002G196100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15708398-15713397 Populus trichocarpa
Potri.002G196100 10.0kb upstream 10.0kb upstream 11999 true Chr02: 15696399-15708397 Populus trichocarpa
Potri.002G196100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15696399-15706398 Populus trichocarpa
Potri.002G196100 10.0kb downstream 10.0kb downstream 11999 true Chr02: 15706399-15718397 Populus trichocarpa
Potri.002G196100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15708398-15718397 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454026 5262 Malpighiales View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain