Gene : Potri.002G190600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31375//PTHR31375:SF43 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  1993
Name:  ? Potri.002G190600 Secondary Identifier:  ? PAC:37257025
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G190600 0.5kb upstream 0.5kb upstream 3172 true Chr02: 15077970-15081141 Populus trichocarpa
Potri.002G190600 0.5kb upstream 0.5kb upstream 500 false Chr02: 15077970-15078469 Populus trichocarpa
Potri.002G190600 0.5kb downstream 0.5kb downstream 3172 true Chr02: 15078470-15081641 Populus trichocarpa
Potri.002G190600 0.5kb downstream 0.5kb downstream 500 false Chr02: 15081142-15081641 Populus trichocarpa
Potri.002G190600 1.0kb upstream 1.0kb upstream 3672 true Chr02: 15077470-15081141 Populus trichocarpa
Potri.002G190600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15077470-15078469 Populus trichocarpa
Potri.002G190600 1.0kb downstream 1.0kb downstream 3672 true Chr02: 15078470-15082141 Populus trichocarpa
Potri.002G190600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15081142-15082141 Populus trichocarpa
Potri.002G190600 2.0kb upstream 2.0kb upstream 4672 true Chr02: 15076470-15081141 Populus trichocarpa
Potri.002G190600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15076470-15078469 Populus trichocarpa
Potri.002G190600 2.0kb downstream 2.0kb downstream 4672 true Chr02: 15078470-15083141 Populus trichocarpa
Potri.002G190600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15081142-15083141 Populus trichocarpa
Potri.002G190600 5.0kb upstream 5.0kb upstream 7672 true Chr02: 15073470-15081141 Populus trichocarpa
Potri.002G190600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15073470-15078469 Populus trichocarpa
Potri.002G190600 5.0kb downstream 5.0kb downstream 7672 true Chr02: 15078470-15086141 Populus trichocarpa
Potri.002G190600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15081142-15086141 Populus trichocarpa
Potri.002G190600 10.0kb upstream 10.0kb upstream 12672 true Chr02: 15068470-15081141 Populus trichocarpa
Potri.002G190600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15068470-15078469 Populus trichocarpa
Potri.002G190600 10.0kb downstream 10.0kb downstream 12672 true Chr02: 15078470-15091141 Populus trichocarpa
Potri.002G190600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15081142-15091141 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122410923 5262 Malpighiales View MSA
124249445 5268 Malvidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain