Gene : Potri.003G005700 P. trichocarpa v3.1
Defline:  (1 of 3) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) Genomic Order:  55
Name:  ? Potri.003G005700 Secondary Identifier:  ? PAC:37235230
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G005700 0.5kb upstream 0.5kb upstream 8937 true Chr03: 476394-485330 Populus trichocarpa
Potri.003G005700 0.5kb upstream 0.5kb upstream 500 false Chr03: 476394-476893 Populus trichocarpa
Potri.003G005700 0.5kb downstream 0.5kb downstream 8937 true Chr03: 476894-485830 Populus trichocarpa
Potri.003G005700 0.5kb downstream 0.5kb downstream 500 false Chr03: 485331-485830 Populus trichocarpa
Potri.003G005700 1.0kb upstream 1.0kb upstream 9437 true Chr03: 475894-485330 Populus trichocarpa
Potri.003G005700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 475894-476893 Populus trichocarpa
Potri.003G005700 1.0kb downstream 1.0kb downstream 9437 true Chr03: 476894-486330 Populus trichocarpa
Potri.003G005700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 485331-486330 Populus trichocarpa
Potri.003G005700 2.0kb upstream 2.0kb upstream 10437 true Chr03: 474894-485330 Populus trichocarpa
Potri.003G005700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 474894-476893 Populus trichocarpa
Potri.003G005700 2.0kb downstream 2.0kb downstream 10437 true Chr03: 476894-487330 Populus trichocarpa
Potri.003G005700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 485331-487330 Populus trichocarpa
Potri.003G005700 5.0kb upstream 5.0kb upstream 13437 true Chr03: 471894-485330 Populus trichocarpa
Potri.003G005700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 471894-476893 Populus trichocarpa
Potri.003G005700 5.0kb downstream 5.0kb downstream 13437 true Chr03: 476894-490330 Populus trichocarpa
Potri.003G005700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 485331-490330 Populus trichocarpa
Potri.003G005700 10.0kb upstream 10.0kb upstream 18437 true Chr03: 466894-485330 Populus trichocarpa
Potri.003G005700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 466894-476893 Populus trichocarpa
Potri.003G005700 10.0kb downstream 10.0kb downstream 18437 true Chr03: 476894-495330 Populus trichocarpa
Potri.003G005700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 485331-495330 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122413367 5262 Malpighiales View MSA
124249674 5268 Malvidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain