Gene : Potri.002G254200 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  2646
Name:  ? Potri.002G254200 Secondary Identifier:  ? PAC:37257447
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWYDQC-4 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G254200 0.5kb upstream 0.5kb upstream 2308 true Chr02: 24328370-24330677 Populus trichocarpa
Potri.002G254200 0.5kb upstream 0.5kb upstream 500 false Chr02: 24330178-24330677 Populus trichocarpa
Potri.002G254200 0.5kb downstream 0.5kb downstream 2308 true Chr02: 24327870-24330177 Populus trichocarpa
Potri.002G254200 0.5kb downstream 0.5kb downstream 500 false Chr02: 24327870-24328369 Populus trichocarpa
Potri.002G254200 1.0kb upstream 1.0kb upstream 2808 true Chr02: 24328370-24331177 Populus trichocarpa
Potri.002G254200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24330178-24331177 Populus trichocarpa
Potri.002G254200 1.0kb downstream 1.0kb downstream 2808 true Chr02: 24327370-24330177 Populus trichocarpa
Potri.002G254200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24327370-24328369 Populus trichocarpa
Potri.002G254200 2.0kb upstream 2.0kb upstream 3808 true Chr02: 24328370-24332177 Populus trichocarpa
Potri.002G254200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24330178-24332177 Populus trichocarpa
Potri.002G254200 2.0kb downstream 2.0kb downstream 3808 true Chr02: 24326370-24330177 Populus trichocarpa
Potri.002G254200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24326370-24328369 Populus trichocarpa
Potri.002G254200 5.0kb upstream 5.0kb upstream 6808 true Chr02: 24328370-24335177 Populus trichocarpa
Potri.002G254200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24330178-24335177 Populus trichocarpa
Potri.002G254200 5.0kb downstream 5.0kb downstream 6808 true Chr02: 24323370-24330177 Populus trichocarpa
Potri.002G254200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24323370-24328369 Populus trichocarpa
Potri.002G254200 10.0kb upstream 10.0kb upstream 11808 true Chr02: 24328370-24340177 Populus trichocarpa
Potri.002G254200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24330178-24340177 Populus trichocarpa
Potri.002G254200 10.0kb downstream 10.0kb downstream 11808 true Chr02: 24318370-24330177 Populus trichocarpa
Potri.002G254200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24318370-24328369 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460347 5262 Malpighiales View MSA
124244542 5268 Malvidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain