Gene : Potri.002G244600 P. trichocarpa v3.1

Defline:  (1 of 11) 2.3.1.188 - Omega-hydroxypalmitate O-feruloyl transferase / O-hydroxycinnamoyltransferase Genomic Order:  2550
Name:  ? Potri.002G244600 Secondary Identifier:  ? PAC:37257249

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7120 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G244600 0.5kb upstream 0.5kb upstream 2143 true Chr02: 23644477-23646619 Populus trichocarpa
Potri.002G244600 0.5kb upstream 0.5kb upstream 500 false Chr02: 23646120-23646619 Populus trichocarpa
Potri.002G244600 0.5kb downstream 0.5kb downstream 2143 true Chr02: 23643977-23646119 Populus trichocarpa
Potri.002G244600 0.5kb downstream 0.5kb downstream 500 false Chr02: 23643977-23644476 Populus trichocarpa
Potri.002G244600 1.0kb upstream 1.0kb upstream 2643 true Chr02: 23644477-23647119 Populus trichocarpa
Potri.002G244600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23646120-23647119 Populus trichocarpa
Potri.002G244600 1.0kb downstream 1.0kb downstream 2643 true Chr02: 23643477-23646119 Populus trichocarpa
Potri.002G244600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23643477-23644476 Populus trichocarpa
Potri.002G244600 2.0kb upstream 2.0kb upstream 3643 true Chr02: 23644477-23648119 Populus trichocarpa
Potri.002G244600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23646120-23648119 Populus trichocarpa
Potri.002G244600 2.0kb downstream 2.0kb downstream 3643 true Chr02: 23642477-23646119 Populus trichocarpa
Potri.002G244600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23642477-23644476 Populus trichocarpa
Potri.002G244600 5.0kb upstream 5.0kb upstream 6643 true Chr02: 23644477-23651119 Populus trichocarpa
Potri.002G244600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23646120-23651119 Populus trichocarpa
Potri.002G244600 5.0kb downstream 5.0kb downstream 6643 true Chr02: 23639477-23646119 Populus trichocarpa
Potri.002G244600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23639477-23644476 Populus trichocarpa
Potri.002G244600 10.0kb upstream 10.0kb upstream 11643 true Chr02: 23644477-23656119 Populus trichocarpa
Potri.002G244600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23646120-23656119 Populus trichocarpa
Potri.002G244600 10.0kb downstream 10.0kb downstream 11643 true Chr02: 23634477-23646119 Populus trichocarpa
Potri.002G244600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23634477-23644476 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791856 5273 Angiosperm View MSA
122453421 5262 Malpighiales View MSA
124249563 5268 Malvidae View MSA
124073014 5270 Rosid View MSA
123746280 5271 Pentapetalae View MSA
122794793 5272 Eudicot View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain