Gene : Potri.002G249300 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR23130//PTHR23130:SF95 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  2596
Name:  ? Potri.002G249300 Secondary Identifier:  ? PAC:37259446

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.002G249300 0.5kb upstream 0.5kb upstream 2763 true Chr02: 23985332-23988094 Populus trichocarpa
Potri.002G249300 0.5kb upstream 0.5kb upstream 500 false Chr02: 23985332-23985831 Populus trichocarpa
Potri.002G249300 0.5kb downstream 0.5kb downstream 2763 true Chr02: 23985832-23988594 Populus trichocarpa
Potri.002G249300 0.5kb downstream 0.5kb downstream 500 false Chr02: 23988095-23988594 Populus trichocarpa
Potri.002G249300 1.0kb upstream 1.0kb upstream 3263 true Chr02: 23984832-23988094 Populus trichocarpa
Potri.002G249300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 23984832-23985831 Populus trichocarpa
Potri.002G249300 1.0kb downstream 1.0kb downstream 3263 true Chr02: 23985832-23989094 Populus trichocarpa
Potri.002G249300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 23988095-23989094 Populus trichocarpa
Potri.002G249300 2.0kb upstream 2.0kb upstream 4263 true Chr02: 23983832-23988094 Populus trichocarpa
Potri.002G249300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 23983832-23985831 Populus trichocarpa
Potri.002G249300 2.0kb downstream 2.0kb downstream 4263 true Chr02: 23985832-23990094 Populus trichocarpa
Potri.002G249300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 23988095-23990094 Populus trichocarpa
Potri.002G249300 5.0kb upstream 5.0kb upstream 7263 true Chr02: 23980832-23988094 Populus trichocarpa
Potri.002G249300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 23980832-23985831 Populus trichocarpa
Potri.002G249300 5.0kb downstream 5.0kb downstream 7263 true Chr02: 23985832-23993094 Populus trichocarpa
Potri.002G249300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 23988095-23993094 Populus trichocarpa
Potri.002G249300 10.0kb upstream 10.0kb upstream 12263 true Chr02: 23975832-23988094 Populus trichocarpa
Potri.002G249300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 23975832-23985831 Populus trichocarpa
Potri.002G249300 10.0kb downstream 10.0kb downstream 12263 true Chr02: 23985832-23998094 Populus trichocarpa
Potri.002G249300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 23988095-23998094 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458150 5262 Malpighiales View MSA
124253692 5268 Malvidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain